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...It allows you to find, display and inspect clones, which are fragments of duplicated source code resulting from lack of proper reuse. It can be used as a plugin for Eclipse and on the commandline.
IndelExtractor is a GUI and command-line application written in Perl that generates various molecular sequence alignment masks, including one to make identification and removal of Indels and their surrounding ambiguous alignment quick and simple.
JTAG base library, ARM7TDMI and MIPS debugger stubs for GDB.
Extendable architecture to add JTAG device drivers, debuggers, and custom JTAG applications.
The phase machine program allows supervised classification of DNA sequence data from different populations using haplotype sequences generated by the PHASE program.
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REPCAL (REverse Polish CALculator) is a light and fast calculator in RPN (reverse polish notation) mode for the console (commandline). It is written in 180 lines of Python code, and can be used both interactively or inside shell scripts.
If you ever needed to perform a variety of functions on a lot of different numbers, Funct is for you. It allows one to create, store, and modify functions which they can apply to numbers from the terminal. Funct is designed to be easy to use but powerful.
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A project to develop in C a commandline based assembler/simulator for 8 bit microprocessors used in bare embedded projects. Currently, the motorola 6502 and intel 8051 are supported. Support for other microprocessors may be added.
Multilayered feed-forward neural network software written in C++. Backpropagation and RPROP are available as training algorithms. Design goals: speed of execution when calculating the output to new data, and quality of training (preprocessing: PCA).
For a given signal, pstool calculates a one-sided power spectrum, i.e. the portion of a signal's power falling within given frequency bins. This is done by employing a one-dimensional real-to-complex FFT routine on an MPI cluster.
A command-line program to manipulate annotated genetic sequences (initially in EMBL format). The user supplies a pattern to identify which features or qualifiers to process. These can then be deleted, renamed etc
A cross-platform simulator for embedded systems, with a plug-in architecture for adding microcontrollers and other devices. Written in C for maximum compatibilty and speed. Currently has support for AVR AT90S8515 and ATmega128.
A toolbox for quantitative morphometric analysis of early development in spherical embryos, such as Xenopus laevis (African Clawed Frog). The toolbox is developed for Matlab 6.5 and higher and combines C-Mex code with Matlab functions.
MISS is a software simulation of the control room of the International Space Station. It is intended to be both entertaining and educational, aimed at high school students. Various pre-configured and random events encourage interaction and groupwork.
Phight - a phylogeny tree building program
Currently, it supports Likelihood method and distance method. This program will includes diagnostic function as a special feature.
2x2 G-statistic software available. Development of species diversity index calculator is planned. Indices include: Shannon-Weiner index, species richness, and Simpson's index. Other diversity indices will be incorporated at a later date.
VKAS uses genetic programming methods to find out the relationship among a set of independent and dependent variable. It is a problem solver software which uses evolutionary computing methods.
When vkas is run, it creates a population of chromosomes at random. This population is then genetically modified and next population is generated. Each population is subjected to fitness calculation and if a suitable answer chromosome is found then vkas stops and the answer is printed. If a...
Custom algebra simplification and rearrangement. 2d, 3d Graphing, numeric evaluation, excact and approximate, exporting to text, HTML and latex-source. ANSI-C, stand-alone.
Interactive C is a stripped down version of the C language, primarily used for robotics projects. It supports various small-scale robotics boards, with a plug-in system for development for new boards.
A service-oriented, single-source, Java integration server with virtual Service Stores(TM) that expose services via web services, HTTP and more. Service Flows provide process automation. Mainframe, database, email, web, soap & ftp adapters are included.