Showing 4627 open source projects for "void based linux"

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  • 1
    Swift Sequence Alignment Program

    Swift Sequence Alignment Program

    GPU-based DNA sequence alignment program using Smith-Waterman

    Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at...
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  • 2

    CSESD-Archiving

    A weather database system built around Campbell Scientific equipment

    Project moved to GitHub: github.com/rejjir/CSESD-archiving
    Downloads: 0 This Week
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  • 3

    AlignMe

    Alignment of membrane proteins

    AlignMe is a C++ program to align distantly related membrane proteins by including several input parameters. Alignments based on substitution matrices, Position Specific Matrices (PSSMs), hydrophobicity scales and any kind of profiles (membrane predictions, secondary structure predictions etc.).
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  • 4

    ProSym

    Software package that facilitates traffic simulation

    Downloads: 0 This Week
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  • Atera all-in-one platform IT management software with AI agents Icon
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  • 5

    Manning Equation Solver

    Calculation of normal depth in open channel based on Manning equation.

    Solver for Manning's equation used for determination of normal depth in open channels. This is pre-alfa version for further development. The main executable file is bash script "mansol.sh", which should be run with the name of data file as argument. Some examples are given. During the execution, the main codes located in "sources" directory are compiled with gfortran.
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  • 6
    Where In the World Have You Been?
    A PHP script with maps of the World, China, Canada, USA, India, Africa and Europe that allows the user to select the countries, provinces or states by clicking on them or selecting a checkboxes. Selection causes the entity to turn a default color which contrasts with defaults colors of all bordering countries. Thus a patchwork is made to show the history of countries, states or provinces traveled. Added features allow users to download their maps, to blow them up to posters of any...
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  • 7
    SOAPsv

    SOAPsv

    SOAPsv: is a program for detecting the structural variation

    This is an approach that complements previous methods for reliable homozygous structural variation identification. Our approach accurately determines genotype and breakpoints relative to a reference genome based on de novo assembly of Illumina Genome Analyzer sequencing data. In this method, we examined only homozygous structural variations because detecting heterozygous structural variations requires assembly of haplotype sequences, which is not yet possible using existing assemblers.
    Downloads: 0 This Week
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  • 8
    Screening Assistant 2
    ScreeningAssistant 2 is a modular software dedicated to perform various simple and advanced chemoinformatics analysis around chemical libraries.
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  • 9
    The program evaluates ordinal expressions and relations. displaying the normal form output in plain text and/or TeX format. It supports notations for ordinals through and somewhat beyond those definable by the Veblen function.
    Downloads: 3 This Week
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    Loan management software that makes it easy.

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  • 10
    µClimaControl

    µClimaControl

    Home made clima control for short expenses. PIC18F4455 based hardware.

    Firmware for small µController board with 4x PT1000 temperature channels which control the temperature in one room via two fan units. PIC18F4455 based hardware. Can be used to control temperature in the basement or guest house, within a computer case, etc.
    Downloads: 0 This Week
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  • 11
    Biome is a C++ library for the development of (individual-based) simulations.
    Downloads: 0 This Week
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  • 12
    Computerized Telescope

    Computerized Telescope

    Arduino lx200 based computerized telescope

    Arduino al/az mount controller based on lx200 protocol.
    Downloads: 0 This Week
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  • 13
    Climate Modeling

    Climate Modeling

    Benefit Your Learning of Climate Modeling

    The goal of this project is to provide a couple of Fortran code to those students who selected the course of "Climate Modeling" in the department of atmospheric and oceanic sciences at Peking University. 这个项目的目标是给选择“气候模拟”课程(北京大学大气与海洋科学系)的同学提供与课程学习有关的源代码程序。 We are subject to GNU/GPL license and happy to open the code to the public. 我们遵守GNU/GPL协议,并乐于开放代码给所有需要的人。
    Downloads: 0 This Week
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  • 14
    DRINKS Toolkit

    DRINKS Toolkit

    DRINKS is a set of smart web-based widgets.

    DRINKS Toolkit is a collection of web-based widget, focused in the first release, to realize an online strumentation. It provides a practical and immediate interface to represent your data in the best possible way. Every widget is drawed using HTML5 Canvas API in a Javascript based environment. Drinks was born to allow users to easily realize custom dashboards without any programming knowledge, infact, you can use your instrument on a webpage simply using HTML tags, or using BarMan...
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  • 15

    chameleon_14443

    Low-cost, ISO 14443 compliant emulator for contactless smartcards

    ! This website is discontinued ! The new, improved MiniChameleon is maintained as of January 2014 on github: https://github.com/emsec/ChameleonMini ATXmega based emulator for contactless smartcards, designed and maintained by Embedded Security Group at the Ruhr-University in Bochum.
    Downloads: 0 This Week
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  • 16
    GraVol

    GraVol

    Drawing-based volume calculator. GraVol=Graph Volume

    GraVol is designed to aid archaeologists in calculating the volume of any revolved container, such as wheel-thrown pottery. It does this using only a drawing of the vessel, and a height or diameter measurement. Instruction video: http://www.youtube.com/watch?v=pC8VReY83q4 Documentation of development: faculty.berea.edu/pearcej/CSC493/projects-11/jonestra-final.pdf
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  • 17
    MICROMECHANICS

    MICROMECHANICS

    A collection of lecture notes and accompanying code on micromechanics

    The collection MICROMECHANICS (micromechanics.zip) includes: (1) lecture notes (microbook.pdf) on the analysis of heterogeneous materials and homogenization, and (2) source codes (microcode.tar.bz2) that accompany the computational exercises in Part II of the notes. Instructions on using the codes are given in the README file of each exercise. Further instructions can be found in the file microcode.tar.bz2. The MATLAB codes are used for visualization, evaluating analytical bounds...
    Downloads: 5 This Week
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  • 18

    CUSHAW: CUDA-based Short Read Alignment

    the first aligner introducing a complete paired-end alignment on GPUs

    CUSHAW is a CUDA compatible short read aligner to large genomes, such as the human genome, based on the Burrows Wheeler transform.
    Downloads: 0 This Week
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  • 19
    Podbat
    A tool to visualize, analyze and store genomic positioning data.
    Downloads: 0 This Week
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  • 20
    FastMap is Java based software that performs quantitative trait locus mapping for gene expression data (eQTL Mapping).
    Downloads: 0 This Week
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  • 21
    Depolarization analysis tools

    Depolarization analysis tools

    Tools for the accurate analysis of Raman depolarization measurement

    This programme addresses the notoriously difficult problem to quantitatively link measured Raman depolarization values to theoretical polarizability tensor quantities, since quantum calculations do not incorporate experimental parameters. A numerical model is programme to calculate, for realistic experimental configurations, effective Raman line strength functions, which find their way into depolarization ratios. The model is based on interlinked integrations over the angles in the light...
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  • 22

    u/sbmv2012

    Taxonomy assignment of metazoans using a python based pipeline

    The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database.
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  • 23
    Fast flexible simulator of spiking neural networks. Easy to use graphical user interface with comprehensive monitoring facilities. Integrates with the NeMo CUDA simulator and the iSpike interface for the iCub robot.
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  • 24
    GAMES ESMI

    GAMES ESMI

    The Energy Sensing and Monitoring Infrastructure of the GAMES project

    This is part of the GAMES Project, which consists of a set of innovative methodologies and Open Source ICT tools for designing and managing energy efficiency in IT Service Centres. The ESMI is the monitoring and sensing infrastructure which allows the fine-grained measurement and provides both an event-based and a real-time stream of data conveying information about the energy consumption in the key points of the overall system. It is completed by a set of Nagios plugin and an assessment...
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  • 25
    Audivolv

    Audivolv

    Artificial intelligence evolves musical instruments played with mouse

    Artificial Intelligence (AI) evolves musical instruments you play with the mouse from small blocks of Java code that operate on numbers, each block designed to keep all numbers in range -1 to 1 if they started in that range, and combinations of these evolved codes running 44100 times per second for high quality 44.1 khz audio. You can also write the Java code into its window. Uses Javassist internal compiler on the new Java code assembled by renaming variables to overlap eachother and...
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