Search Results for "java open source" - Page 70
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Showing 16942 open source projects for "java open source"
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Goal of this projects is to design unified general binary data format and to provide open-source libraries and tools for it.
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C-squares
Concise spatial query and representation system (c-squares)
C-squares is an easily implemented method for storage, querying and display of spatial data locations, based on a hierarchical, grid-based representation of the Earth' surface. Source code for encoding, decoding, mapping, etc. is provided via this site. Additional support is available by contacting the system developer, Tony.Rees@marinespecies.org; see also the c-squares home page at http://www.cmar.csiro.au/csquares/ . -
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DAMIAN
Identification of pathogenic microorganisms in diagnostic samples
DAMIAN provides capabilities to detect known and novel pathogens in RNA and DNA samples of various sources. It integrates all required processing steps, ranging from the quality control of sequencing reads to the generation of comprehensive reports. The method works for any host organism. -
Retool your internal operationsBuild internal software that meets enterprise security standards without waiting on engineering resources. Retool connects to your databases, APIs, and data sources while maintaining the permissions and controls you need. Create custom dashboards, admin tools, and workflows from natural language prompts—all deployed in your cloud with security baked in. Stop duct-taping operations together, start building in Retool.
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TaxOnTree
A program for associating taxonomic information in a phylogenetic tree
TaxOnTree is a phylogenetic program for associating Taxonomic information in a phylogenetic tree. The output is a NEX format tree file configured to be opened in FigTree, that users can promptly color by any taxa or by the ancestrality shared by sequences with query. Input can be a Fasta formatted file to be used in a BLAST search or a list of sequences represented by their identifiers (UniProtAC or NCBI gi), if a cluster is already available. Also, a newick file produced with user software... -
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FiboSearch
Efficiently locate minumum of function of non-negative integer
Fibonacci search for functions! Given a real-valued function of a non-negative integer with one minimum at i in {0, 1, 2, ..., n} and no local minima, efficiently locate that minimum in log (n) time. -
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sciNote
Open source electronic lab notebook (ELN) for scientists
sciNote is an open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place. sciNote is specifically designed for life science students, researchers, lab technicians and group leaders. -
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COHCAP
City of Hope CpG Island Analysis Pipeline
COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). Please note: 1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version: https://github.com/cwarden45/COHCAP This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through... -
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Jacksum
a free cross platform checksum utility, supports 58+ hash algorithms
Development of this project has been moved to https://github.com/jonelo/jacksum. This site has been left for historical purposes ONLY, you find older Jacksum versions here. Please visit the GitHub site for current development. Jacksum 1.7.0 is a platform independent checksum utility (written entirely in Java) for computing and verifying (integrity check) checksums, CRC and hashes (fingerprints). It supports 58 popular hash algorithms and a lot of unique features. -
Total Network Visibility for Network Engineers and IT ManagersThis means every device on your network, and every interface on every device is automatically analyzed for performance, errors, QoS, and configuration.
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iHome by ionware
iHome Smart Home System Platform
iHome is a fully tested Smart Home Automation system using the Raspberry Pi Zero WiFi SBC and Linux OS and has all the functional features of NEST or ECOBEE smart thermostats with the added benefit of full privacy and security at less than half the price! It incorporates MBLogic with algorithms and Modbus coms for HVAC home control via the ionware modbus compatible ionC1 input/output controller board. The iHome software system comes fully configured as a SD Card image file for... -
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OS X Portable Applications
Portable OS X FOSS applications
OS X FOSS portable applications are packaged so you can carry around on any portable device, USB thumb drive, iPod, portable hard drive, memory card, other portable device (or also on your internal hard disk), taking your preferences with you. -
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Flint
A simulator for biological and physiological models
Flint is a simulator for biological and physiological models written in CellML, PHML and/or SBML. -
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Relative Overestimation VOP
VOP compression for MRI with overestimation control
**** This work is outdated! For better compression and speed use these: ***** https://sourceforge.net/projects/enhanced-sar-compression/ Virtual Observation Points SAR compression. Contains multiple Algorithms: Compression according to Eichfelder et al. and Lee et al. The Lee algorithm is enhanced by including overestimation control to reduce maximum relative overestimation. All algorithms are implemented in Matlab and were optimized for enhanced speed. Needs Matlab R2016b at least.... -
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Quadric
Application for simple base-2 binary to base-4 DNA-code conversion
Quadric is an opensource file converter created by the Jomcraft Network development team. In it's core functionality this small utility can transform base-2 binary files into base-4 DNA-coded human-legible ASCII-files. -
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RMGDFT
Real Space Multigrid based electronic structure code.
News: active RMG development has moved to github https://github.com/RMGDFT News: V4.1.0 released on 09/29/2020 News: V4.0.0 released on 09/01/2020 with major updates. News: V3.0.0 released on 06/09/2018 with major updates. News: V2.2.2 released on 10/14/2017 with minor bug fixes. News: V2.2 with performance enhancements, bug fixes and new features released on 06/26/2017. Sources are available with binaries to follow soon. News: V2.1 with many improvements released on... -
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A Java library for evolutionary biology and bioinformatics, including objects representing biomolecular sequences, multiple sequence alignments and phylogenetic trees.
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A simple tool to compute extent of spatial overlap associated with electronic transitions based on natural transition orbitals (NTOs)
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Epidemic-Simulation
Simulate an epidemic like the Corona Pandemic and look at statistics
With Epidemic-Simulation you can look at the development of a corona-like epidemic or pandemic, impose a lockdown and follow the statistics. When imposing a lockdown there will be a marker in the statistics about the beginning and the end of the lockdown. There is a simple movement simulation of the people. If a susceptible person gets close to an infected person their viral load increases and they might get infected. This software is very new and will be updated from time to time.... -
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Program wordTabulator is intended for text analysis. It can generate index of word elements extracted from defined text set. Word elements may be words, N-grams or phrases (syntagmes). The program can process texts as in ordinary 1-byte encoding (ANSI), as in multibyte UTF-8 encoding.
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Combinatorial Game Suite
A computer algebra system for research in combinatorial game theory.
STARTING WITH VERSION 2.0, CGSUITE HAS MOVED TO GITHUB. The latest version can be found at the CGSuite homepage: https://www.cgsuite.org/ This page is preserved for archival purposes only and is no longer being maintained. -
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MMAP
Multi-core Method for Analysis Pipelines
For more information, please see home page. -
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Pack-Print-Cut
Packing two dimensional rectangular elements at orthogonal table
Program was created for optimized packing of two dimensional rectangular elements at orthogonal table with main purpose of printing cutting sheets that can be used for cutting material at production in wood and panel furniture manufacturing. It is developed upon authors several years of experience at woodworking, and actual carpenters needs when such software is in question. In spite its look it is fully functional peace of software , with all necessary elements needed for generating... -
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The most recent distribution of MyOpenLab can be downloaded from: myopenlab.org Follow us on Facebook as MyOpenLab Colombia https://www.facebook.com/myopenlabcolombia/ Subscribe, like and watch our MyOpenLab videos: https://www.youtube.com/channel/UCet6UPnaHKGjtbytJHIf2jQ Thanks!
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The main goal of this project is to develop new algorithms of machine learning and collect examples of existing methods. This collection pursues scientific and educational purposes.
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The Player Project: Player is a networked interface to robots and sensors. Stage and Gazebo are Player-friendly multiple-robot simulators. The software aims for POSIX compliance and runs on most UNIX-like OS's. Some parts also work on Windows.
