Search Results for "input file rings" - Page 6

Transliterator between any Language files - Map Fonts, Create Encoding Scheme, Input Phonetic, Indian, Roman, Tamil, Hindi, English, French, German, Spanish or Any World Language Keyboard. Ex: [Phonetic Input]-[Any World Language Output] or ViceVersa.

MCell is a Monte-Carlo simulator for spatial stochastic modelling of protein interactions. It requires a specific input file format called Model Description Language (MDL). MDL2SBML is a converter that translates MDL into the more widely recognised Systems Biology Markup Language (SBML) in order to facilitate model sharing and analysis with a wider range of tools. MDL2SBML translates molecule definitions, reactions and variables from MDL to SBML. MCell concepts that have (as of yet...

... fundamental problems in phylogenetics. Therefore, for my own educational benefit, all code is original. Of course, there are probably a good deal of mistakes as well. I distribute Javamony, as I did Pysimony, hoping that it will be of educational value to someone else or at least vaguely amusing. Upcoming features will be: - Support for Amino Acid sequences - Support for additional file formats (e.g. Nexus) - Multithreading - Additional scoring methods (e.g. maximum likelihood)

Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at http://www.gputechconf.com/gtcnew/on-demand-GTC.php?sessionTopic=58...

Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually. It has been renamed "pdatascope" to avoid a name-clash with Pyscope, a scoping package on PyPi. See https://sourceforge.net/p/pydatascope/ for the latest code.

this script is to visualize the coordinates data. the input is ncbiblast tabular format or a simple coordinates file. output is a png graph file

This project provides the source code for the Mitochondiral Infectious Damage Adaptation (MIDA) model of aging. A probabilistic modeling approach is applied by solving the master equation in mitochondrial quality state space in the presence of fusion-fission events, decay of functional quality, mitophagy and mitochondrial biogenesis, as well as molecular damage originating from a random source or from infectious events during fusion and fission. The provided source code is written in...

A HP41CV simulator for the Android platform. This version is the second beta release and includes nearly all functionality of the HP41CV including running programmes. Programmes can be imported / exported on csv format. A simple programme editor incl

CAD Scripts project is designed to automate the work of CAD Softwares. Here you will find scripts/softwares which help to do tasks easily. E.g- Specify coordinates of figures in input file and get output dxf file without actually drawing anything.

This program was written to dimonstrate errors in transmission for a presentation on Claude Shannon's Noisy Channel Coding Theorem. It takes an input file, the probability of a bit being flipped, and, if specified, the size of the header of the file. The program was intended to take monochrome bitmap files as input, so that each bit refers to a pixel in the image and thus, it would be easy to see errors in the output file, as some of the pixels would be flipped; however, it will work on any...

SW for creation of arrows and ellipses shapefiles for visualization of vectors error ellipses etc. Input is structured text file. Output is shapefile (open specification from ESRI). Shapefile is widely used in GIS SW.

Convert ESRI Shape file (.shp) to Polish text (.mp) for MapEdit.

Package with various tools for the programmer in UNIX environments. Contains classes for time measuring, image and file manipulation as well as arbitrary precision arithmetics.

CIVx is a free advanced PIV (Particle Imaging Velocimetry) code, developped in Fortran and C++. Input : pair of png images. Output : velocity field in NetCDF format. It is used by the UVMAT Matlab code develloped at LEGI.

SimKernel controls parameter scans and iterations for any given C++ code / scientific simulation. Parameters, iteration ranges, settings and dependencies are specified in Mathematica syntax. Parallel processing of parameter scanning via MPI.

DASS-GUI is a graphical user interface for pattern search in non-sequential data.

Little Cohesion Helper (LCH), alias TraglWeck, semi-automates the annotation of lexical-cohesion in a given text. Input is a raw text file and this software generates a bunch of XML files which can be used with MMAX2.

VisualSense was developed to serve as an analysis tool for textual and numerical data extracted from image analysis of artwork from different cultures and influences. It can be used for any kind of data respecting the format (specified in the README)

g03mem takes a Gaussian 03 input file and gives the computational requirements needed for its execution.

Optex Analyzer is a software to analyze and compare algorithms to solve approximately optimization problems. It has a GUI that allows select a set of input files containing raw algorithm results. The analysis is shown with tables and charts.

This windows program is a very basic simulator with an eclectic feature set. It simulates the 3 space dimensions, time, gravity and mass. Fixed length text file lists input points, lines, polygons. Includes 2 star catalogs. Key and mouse controls.

The project is aiming to do two things: track the total transit time it takes a news story to travel from site A to site Z across the net and we'll be indexing the content of the article at each hop and tracking the morphing of the content as it goes

Order Switchable Column Table (OSCT) is a framework of tab-delmited format in molecular biology. OSCT, developed in RIKEN OSC, provide a general framework to capture meta-data (such as input file, protocol, parameters, etc) as well as the data itself.

Nekoshka is a cross-platform open-source shell for Japanese dictionaries like edict and yarxi. It supports radical lookup, handwriting and direct keyboard input.

BCAR is a library for the associative classification, which denotes "Boosting Class Association Rules". BCAR provides a general tool for classification tasks with various types of input data.