Showing 2657 open source projects for "sql command line"

View related business solutions
  • Go From AI Idea to AI App Fast Icon
    Go From AI Idea to AI App Fast

    One platform to build, fine-tune, and deploy ML models. No MLOps team required.

    Access Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
    Try Free
  • Forever Free Full-Stack Observability | Grafana Cloud Icon
    Forever Free Full-Stack Observability | Grafana Cloud

    Our generous forever free tier includes the full platform, including the AI Assistant, for 3 users with 10k metrics, 50GB logs, and 50GB traces.

    Built on open standards like Prometheus and OpenTelemetry, Grafana Cloud includes Kubernetes Monitoring, Application Observability, Incident Response, plus the AI-powered Grafana Assistant. Get started with our generous free tier today.
    Create free account
  • 1

    Genetic data converter

    Convert genetic data for hapmixmap software

    Genetic data converter, for hapmap.org and hapmixmap data formats. Reads data in tabular format and writes in hapmixmap format. It's possible to add extensions to output different data formats.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 2

    AutoMap

    AutoMap is a tool for structural biology and drug design.

    AutoMap takes a series of poses obtained from molecular docking and applies the site, epitope and conformational mapping techniques to the poses to select likely ligand binding modes.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 3
    PRINSEQ
    A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.
    Downloads: 26 This Week
    Last Update:
    See Project
  • 4
    surfit is an open source and free gridding and contouring software. surfit can do interpolation/approximation of points, contours and surfaces, can take fault lines and trend surfaces into account, can use inequalities and other conditions. Supports a lo
    Downloads: 5 This Week
    Last Update:
    See Project
  • Stop Storing Third-Party Tokens in Your Database Icon
    Stop Storing Third-Party Tokens in Your Database

    Auth0 Token Vault handles secure token storage, exchange, and refresh for external providers so you don't have to build it yourself.

    Rolling your own OAuth token storage can be a security liability. Token Vault securely stores access and refresh tokens from federated providers and handles exchange and renewal automatically. Connected accounts, refresh exchange, and privileged worker flows included.
    Try Auth0 for Free
  • 5
    Const-Calc

    Const-Calc

    Construction Calculator

    ...Currently it incorporates for units; feet, inches, feet and inches, square feet, square inches, square yards, cubic feet, cubic inches, cubic yards, and plain decimal. For operations you can add, subtract, multiply, and divide. You can also use () for grouping. The program uses a GUI. My future plans include incorporating; a command line interface, figuring roof slopes, rafters and stairs.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 6

    VisualRiSC

    Toolbox visualizing computations of Realizable Sign Conditions.

    This toolbox contains a set of Python procedures in order to compute examples associated with the computation of Realizable Sign Conditions (RiSC) due to the approach by Basu, Pollack and Roy. The RiSC approach is a way to solve and analyze systems of polynomial equations and inequalities over the real numbers in the field of real-algebraic geometry. The involved computations often consist of highly sophisticated notions, not easy to illustrate by hand. VisualRiSC provides implementations of...
    Downloads: 0 This Week
    Last Update:
    See Project
  • 7
    Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 8

    c4nhanes

    command line tools for processing tab delimitted statistics

    The national health and nutrition examination survey (NHANES) is done by the center for national health statistics. Data is made available for public use by this group for research; however, it is in a format that is not universible accessible. This provides the data in a simple format as well as a set of tools to manipulate the data. It can interface with open office and libreoffice using their csv filter.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 9
    Gebabbel

    Gebabbel

    A frontend for gpsbabel

    Gebabbel is a GUI for the famous gpsbabel, a command line tool to convert various GPS file formats back and forth. Thanks to gpsbabel, you cannot only convert files but also exchange data with your GPS device (e.g. Garmin and Magellan) directly.
    Downloads: 0 This Week
    Last Update:
    See Project
  • MongoDB Atlas runs apps anywhere Icon
    MongoDB Atlas runs apps anywhere

    Deploy in 115+ regions with the modern database for every enterprise.

    MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
    Start Free
  • 10
    iTree: scalable multithreaded phylogenomic pipeline
    Downloads: 0 This Week
    Last Update:
    See Project
  • 11

    tagfs

    Tag based file manager CLI

    A Tag based file management system. Command line interface. User can add tags for files (individually or for the folder). Allows search by tags.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 12

    SchizoHit

    cluster paired-end sequences

    Like CD-HIT, but works with paired-end reads
    Downloads: 0 This Week
    Last Update:
    See Project
  • 13
    EASER

    EASER

    Ensembl Easy Sequence Retriever

    Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 14

    Online XOR Coding

    Online XOR packet coding BENEFIT

    The project page provides the source code of custom built simulators used in our publications whose URL are given as follow: http://dx.doi.org/10.1016/j.comcom.2013.09.006 http://dx.doi.org/10.1109/PIMRC.2009.5449983 The titles of the papers are: Online XOR packet coding: Efficient single-hop wireless multicasting with low decoding delay (COMCOM VERSION). An efficient network coding based retransmission algorithm for wireless multicast (PIMRC VERSION). Help (README) files...
    Downloads: 0 This Week
    Last Update:
    See Project
  • 15
    guiLiner provides a representation of another program's options and information, enabling one to run a command line program directly from a GUI. In other words, guiLiner creates a GUI for almost any command-line program.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 16
    DOMjudge programming contest jury system

    DOMjudge programming contest jury system

    DOMjudge is an automated judge system for programming contests.

    NOTE: DOMjudge has moved to www.domjudge.org and Github for all development. DOMjudge is an automated judge system to run programming contests. Both team and jury side interfaces are web based, with a command line submit tool available as well. It is written in PHP, shell-script and C/C++ and needs MySQL and a webserver.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 17
    A pipeline to revise a genome sequence of a prokaryotic sample via an iterative backbone remapping and local assembly method.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 18
    Generate pdf diagrams for analemmatic sundial construction, papercraft sundial, and "plus" card game.
    Downloads: 2 This Week
    Last Update:
    See Project
  • 19

    MendelScan

    Variant scoring and linkage mapping for family exome sequencing

    MendelScan is a tool for prioritizing candidate variants in family-based studies of inherited disease.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 20

    SunlightDPD

    Open source codes related to dissipative particle dynamics

    SunlightDPD provides a home for open source codes related to the dissipative particle dynamics (DPD) simulation method. Currently the file release contains the HNC integral equation code.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 21
    Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 22

    Molcrunch

    An atomic or molecular electronic properties computational package

    THE NEW, 11/7/2013 VERSION OF MOLCRUNCH IS HERE Molcrunch is an atomic or molecular electronic properties computational package. It provides Gaussian and Slater orbital support for SCF, MCSCF, and orthogonal or nonorthogonal orbital CI calculations. Its most sophisticated feature is a configuration manipulation CI package that provides symmetry filtering, orbital occupation selection, and a choice of many other wave function and/or basis characteristics. The symmetry filtering...
    Downloads: 0 This Week
    Last Update:
    See Project
  • 23

    Calc

    A free command line calculator.

    Downloads: 0 This Week
    Last Update:
    See Project
  • 24
    BETR-Research (BETRS) is a modelling framework to create spatially resolved multimedia models for the environmental fate- and transport of chemical contaminants. It is intended to serve the research community and can be used as a teaching tool.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 25
    Java application for training and deploying text processing applications such as part-of-speech taggers, based on a re-implementation of Brill's algorithm in Java.
    Downloads: 0 This Week
    Last Update:
    See Project
MongoDB Logo MongoDB