Search Results for "java projects on linux" - Page 42
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Showing 4726 open source projects for "java projects on linux"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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PepSir
PepSir checks and filters for peptide proteotypicity.
PepSir checks and filters for peptide proteotypicity. -
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Auto Primer3
Automatically design primers to genes/coordinates using primer3.
PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/autoprimer3) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/autoprimer3/releases/latest). AutoPrimer3 retrieves gene information, DNA sequences and SNP information from the UCSC genome browser and uses primer3 to automatically design primers to genes or genomic coordinate targets. Primers may be designed using information from any of the UCSC hosted genomes... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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P-VCD
Content-Based Video Copy Detection
Software for Video Copy Detection. The software has been described in some scientific papers, e.g. http://dx.doi.org/10.1109/ICME.2011.6012212 and http://dx.doi.org/10.1007/s11042-011-0915-x. This software is the result of my PhD at the University of Chile and the participation at TRECVID Content-Based Copy Detection (CCD) evaluation task 2010 and 2011. More details in http://www-nlpir.nist.gov/projects/tv2011/tv2011.html#ccd and in... -
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A mapping application written in Java that displays Ordnance Survey maps downloaded from OS's getamap website or maps from the OpenStreetMap project. It is possible to add new map sources or extra functionality through plugins.
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p-TAREF
Plant miRNA target prediction tool
Developed by Dr Ravi Shankar (Corresponding author) and Ashwani Jha @ SCBB, CSIR-IHBT. p-TAREF stands for plant TARget REFiner. It identifies plant microRNA targets on the basis of multiple feature information. Read more http://www.biomedcentral.com/1471-2164/12/636 Query, comment etc please mail any one of us @ ashwanijha.bioinfo@gmail.com or ravish9@gmail.com -
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NexusDataLink
Connect, monitor and control your (embedded) systems remotely. m2m/IoT
Connect, monitor and control your systems or embedded devices remotely (m2m/IoT) - for example your Raspberry Pi. The communication interface is defined in XML automatically providing a REST interface. NexusDataLink integrates smoothly in existing software or firmware and significantly reduces connection- or communication-related source code. -
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The JINSECT toolkit is a Java-based toolkit and library that supports and demonstrates the use of n-gram graphs within Natural Language Processing applications, ranging from summarization and summary evaluation to text classification and indexing.
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Enterprise-grade ITSM, for every businessFreshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
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Exreco
EXperimental REplicator COllider
The project is moved to GitHub : https://github.com/bekisz/exreco/ Exreco is a agent based platform for the simulation and study of the Darwinian evolutionary process. It aims to support the exploration of genetically rooted phenomena like - aging (programmed cell death) - sexual and asexual reproduction - altruism of individuals - spread of diseases The typical way of using Exreco starts by defining the behavior of your replicators ( agents that can reproduce and evolve over... -
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OntoMetriCalc
A Java API for measuring OWL ontologies
OntoMetriCalc (Ontology Metrics Calculator) is a Java API for measuring OWL ontologies based on Jena. -
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HaploView is a Java based tool for use by biologists in the study of genetic haplotype data. It provides a quick, easy interface to many common tasks involved in such analyses. Please go to the homepage below for the latest version!
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gametes
Generate complex SNP models and heterogeneous datasets
Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model. User friendly GAMETES software... -
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GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded. This project has moved to GitHub: https://github.com/GenomeView/genomeview
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CPS Wildfire Management Tool
A wildfire decision support system and visualization tool from Emxsys.
The Wildfire Management Tool (WMT) predicts the potential fire behavior of a wildland fire. WMT incorporates a 3D terrain viewer, the tenets of the Campbell Prediction System (CPS) and the Rothermel fire spread equations to depict fire behavior. WMT is used to adjust tactics & strategies to ensure the safety of firefighters and the effective use of firefighting resources. Requires Java 8 (included) - http://www.java.com/download -
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OpenGisScada
Sistema de Control Medioambiental
Version 1.0 - Controles java para supervision de informacion distribuida geograficamente. Utilidades GIS, comunicaciones, bases de datos, graficas, protocolos. Versión 2.0 - Arquitectura J2EE, sobre servidor de aplicaciones JBoss NUEVO: Versión 2.1 - Migrado a JBoss-as-7.1.1-Final -
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MathToWeb is a Java-based authoring tool that converts mathematical expressions written in AMS-Latex to presentation MathML. It can be applied to single equations or entire documents containing many hundreds of equations.
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GeoKettle is a powerful, metadata-driven spatial ETL (Extract, Transform and Load) tool dedicated to the integration of different data sources for building and updating geospatial databases, data warehouses and services.
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MZmine 2
A framework for differential analysis of mass spectrometry data
MZmine 2 is a framework written in Java for differential analysis of mass spectrometry data. -
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libsharp
Library for spherical harmonic transforms (SHT)
NOTE: as of April 24, 2015, libsharp development has moved to Github (https://github.com/dagss/libsharp). Libsharp is a collection of algorithms for efficient conversion between maps on the sphere and their spherical harmonic coefficients. It supports a wide range of pixelisations (including HEALPix, GLESP, and ECP). This library is a successor of libpsht (http://sourceforge.net/projects/libpsht). A scientific overview over the functionality is given in the paper available at... -
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BoardCAD is an easy to use CAD/CAM-program that allows you to quickly design your own surfboards. It is written in Java and can export STEP-files for compatibility with other CAD-systems, and g-code for CNC machines.
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SCaVis
Scientific Computation and Visualization Environment
SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential... -
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GeneticThesaurus
Annotation of genetic variants in repetitive regions
GeneticThesaurus enables analysis of genetic variation in repetitive regions. See project wiki for details. -
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TE-locate
a tool for calling transposons
TE-locate is a tool to locate all copies of sequences in a reference sequence using read-pairs. TE = Transposable Element Input is NGS-data. Please download all files first (including the demo data) and make your first run then.
