Search Results for "linux command" - Page 40
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Showing 2463 open source projects for "linux command"
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Discrete Dipole Aproximation Project
Plugin orientated Discrete Dipole Approximation (DDA) Solver
Discrete Dipole Approximation Project, is a software package designed to solve the Discrete Dipole Problem by the Discrete Dipole Approximation (DDA) method. This software is desgined to be plugin operated allowing for easy implimincation of new solver methods to improve the efficienty of the code. The plugin support also allow the program to write its output in multiple formats and structures defined by plugins. -
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fesslix
Stochastic Analysis
A brief summary of the main features of Fesslix: - Perform non-intrusive reliability analysis or Bayesian updating either --- by running commands on the command line or --- by means of an Octave interface or --- by means of a Python interface - Flexible input language for writing Fesslix parameter files --- Control flow statements (e.g. if, for, while) --- Most parameters can be defined as functions - Working with response surfaces - Linear finite element analysis using truss, beam... -
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Fekke's BMI calculator
C# BMI Calculator with wizzard.
An application written in C#, which will assist you in calculating your Body Mass Index. -
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A collection of bioinformatics-related software created by members of Cancer Research UK (possibly among others).
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ADM to GPX
Convert a Garmin ADM database file to a GPX file
User data exported from later model Garmin GPSmap marine GPS sets consists of ADM files written to a VFAT-formatted SD card. This data includes user-generated waypoints and routes, and recorded GPS tracks. adm2gpx converts this data to industry-standard GPX records that may be imported into third-party mapping and GPS software. -
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t2t-pipe
automatic alignment pipeline for parallel treebanks
The *Tree-to-Tree (t2t) Alignment Pipe* is a collection of python scripts, co-ordinating the process of automatic alignment of parallel treebanks from plain text files with a single call from a unix command line. Supported Languages: DE, FR, EN -
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Autonomous Robot Simulator
Physically-accurate robotics simulator written in Python
ARS is a physically-accurate robotics simulator written in Python. It's main purpose is to help researchers with to develop mobile manipulators and, in general, any multi-body system. It is open-source, modular, easy to learn and use, and can be a valuable tool in the process of robot design, in the development of control and reasoning algorithms, as well as in teaching and educational activities. -
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It is a software to program ISP based 8051 controllers(89SXX) on Linux. The software decodes the hex file entered from the command line and send it to controller's flash memory using PC's parallel port.The hardware connections are very minimal.
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Genetic data converter
Convert genetic data for hapmixmap software
Genetic data converter, for hapmap.org and hapmixmap data formats. Reads data in tabular format and writes in hapmixmap format. It's possible to add extensions to output different data formats. -
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AutoMap
AutoMap is a tool for structural biology and drug design.
AutoMap takes a series of poses obtained from molecular docking and applies the site, epitope and conformational mapping techniques to the poses to select likely ligand binding modes. -
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Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
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PDF command line document creator
Smart utility for create PDF documents from command line.
The PDF command line document creator it is a small utility to create PDF documents quickly using the command line. It is very useful for example to create labels for printing later, this is the reason why I created this application but it can create other types of documents. This application can create text, figures primitive images, some bar codes, QR codes, Datamatrix and PDF417. I am open to suggestions. -
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surfit is an open source and free gridding and contouring software. surfit can do interpolation/approximation of points, contours and surfaces, can take fault lines and trend surfaces into account, can use inequalities and other conditions. Supports a lo
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A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.
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Framework for individual and population genome assembly and discovery of genetic variants from sequence reads.
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Gebabbel
A frontend for gpsbabel
Gebabbel is a GUI for the famous gpsbabel, a command line tool to convert various GPS file formats back and forth. Thanks to gpsbabel, you cannot only convert files but also exchange data with your GPS device (e.g. Garmin and Magellan) directly. -
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c4nhanes
command line tools for processing tab delimitted statistics
The national health and nutrition examination survey (NHANES) is done by the center for national health statistics. Data is made available for public use by this group for research; however, it is in a format that is not universible accessible. This provides the data in a simple format as well as a set of tools to manipulate the data. It can interface with open office and libreoffice using their csv filter. -
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SchizoHit
cluster paired-end sequences
Like CD-HIT, but works with paired-end reads -
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EASER
Ensembl Easy Sequence Retriever
Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335. -
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tagfs
Tag based file manager CLI
A Tag based file management system. Command line interface. User can add tags for files (individually or for the folder). Allows search by tags. -
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Online XOR Coding
Online XOR packet coding BENEFIT
The project page provides the source code of custom built simulators used in our publications whose URL are given as follow: http://dx.doi.org/10.1016/j.comcom.2013.09.006 http://dx.doi.org/10.1109/PIMRC.2009.5449983 The titles of the papers are: Online XOR packet coding: Efficient single-hop wireless multicasting with low decoding delay (COMCOM VERSION). An efficient network coding based retransmission algorithm for wireless multicast (PIMRC VERSION). Help (README) files... -
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DOMjudge programming contest jury system
DOMjudge is an automated judge system for programming contests.
NOTE: DOMjudge has moved to www.domjudge.org and Github for all development. DOMjudge is an automated judge system to run programming contests. Both team and jury side interfaces are web based, with a command line submit tool available as well. It is written in PHP, shell-script and C/C++ and needs MySQL and a webserver. -
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guiLiner provides a representation of another program's options and information, enabling one to run a command line program directly from a GUI. In other words, guiLiner creates a GUI for almost any command-line program.
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Molcrunch
An atomic or molecular electronic properties computational package
THE NEW, 11/7/2013 VERSION OF MOLCRUNCH IS HERE Molcrunch is an atomic or molecular electronic properties computational package. It provides Gaussian and Slater orbital support for SCF, MCSCF, and orthogonal or nonorthogonal orbital CI calculations. Its most sophisticated feature is a configuration manipulation CI package that provides symmetry filtering, orbital occupation selection, and a choice of many other wave function and/or basis characteristics. The symmetry filtering...