Showing 162 open source projects for "script executor mac"

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  • 1

    portas

    Pequeno script em Python para provar o problema de Monty Hall

    O jogo consiste no seguinte: Monty Hall (o apresentador) apresentava 3 portas aos concorrentes, sabendo que atrás de uma delas está um carro (prémio bom) e que as outras têm prêmios de pouco valor. Na 1ª etapa o concorrente escolhe uma porta (que ainda não é aberta); De seguida Monty abre uma das outras duas portas que o concorrente não escolheu, sabendo à partida que o carro não se encontra aí; Agora com duas portas apenas para escolher — pois uma delas já se viu, na 2ª...
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  • 2
    Linux Guist - Multi Lingual OS for Asia

    Linux Guist - Multi Lingual OS for Asia

    A Single Click Language Changer and Publishing System for Web and DTP

    Linux Guist - is a Multi Lingual Live CD OS for most Asian Languages, with the ability to run of a CD & Old Hardware, with just 128 MB Memory, for DTP, Web Publishing & Data Entry purposes. This will help IT employers to take up Govt. Projects that require Data Collection, Entry & Publishing at a very very low cost, while providing Training & Job Opportunities to numerous students of these languages, in the various towns, of the country. Talk to your respective IT/HRD ministry to identify...
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  • 3
    q pipeline manager

    q pipeline manager

    q: integrated platform for pipeline configuration and management

    The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently...
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  • 4

    Osmotic Pressurization Dynamics

    Calculates dynamics of osmosis-based pressure generation using PEG.

    This MATLAB script calculates pressure as a function of time inside a submerged membrane-bound compartment containing an aqueous PEG solution as an osmotic driver. It can also be used to calculate a membrane's hydraulic permeability by fitting experimental data. The model used accounts for the dilution effects caused by the compartment's expansion. All of this project's resources can be found in the "Files" section.
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  • 5

    2D-Physics-Engine

    2D physics engine and simulation

    Simulate 2D physics with my engine entirely made in JavaScript. Modify live existing scenarii or create your own from scratch with the live editor. Try it on the demo web site! :) Note : If you intend to download and use the sources as it is, you need to host it as scenario resquests are made in AJAX.
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  • 6
    Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
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  • 7

    Language Constructor

    Complete tool for constructing/manipulating languages in digital form

    With this tool you can easily design a new language, digitize an existing one or incrementally reconstruct an ancient language. It allows for free experimentation of all aspects of the language, so it does not have to be made consistent on paper first. You can edit script, syntax, grammar, morphology, lexicon and phonology, as well as write documents in the language, as it might be too complex to be handled by current font technology. The information is stored in xml format for easy...
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  • 8
    Nature
    Nature is an open source library for computing thermochemical and kinetic properties of complex gas mixtures. The library supports the CHEMKIN data format and a native script for defining complex gas mixtures. Nature is written in C# and does not depend on any third party tool or library. Nature interoperates natively with any .NET language including the FTN95: Fortran 95 compiler. The primary goal of the project is to deliver the open source that provides the foundation for potentially...
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  • 9
    DOMjudge programming contest jury system

    DOMjudge programming contest jury system

    DOMjudge is an automated judge system for programming contests.

    NOTE: DOMjudge has moved to www.domjudge.org and Github for all development. DOMjudge is an automated judge system to run programming contests. Both team and jury side interfaces are web based, with a command line submit tool available as well. It is written in PHP, shell-script and C/C++ and needs MySQL and a webserver.
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  • 10

    nwhess2freq

    Calculates frequencies/modes from an nwchem generated hessian

    This is a simple Octave script which calculates the frequencies/normal modes from an nwchem generated hessian matrix. The advantage of having a separate script for this is that you can use the same hessian to calculate frequencies for different isotopic substitutions i.e. you only have to run one nwchem calculation. The script is finished in its current form in the sense that it is feature complete. Feel free to amend, translate, copy, steal etc. See the README in the code repository...
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  • 11
    FastAlign.pl

    FastAlign.pl

    FastAlign is a perl script which uses the heuristic method of tfasty

    FastAlign.pl provides a more intuitive output to find exon-intron junctions. The query string is in amino acids and the hit string is in nucleotides. There are extra nucleotides at the end of the hit string (option -diff and by default = 10), that allow to verify if the intron start with common rules (5'-GTGCGA-... for group II intron and after an exonic T for group I intron). If you have Emboss, you can genarate a graphic with option -graph 1. Dependencies: - Perl - Bioperl - UNIX...
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  • 12

    nwbas2ecce

    nwbas2ecce converts nwchem basis set files to the ECCE format

    The basis sets included with ECCE have -- as far as I can tell -- not been updated for many years. In addition, many of the newer basis sets that come with nwchem aren't included, such as the def2- series. nwbas2ecce is a python script that aims to automate as much as possible of the conversion process of a nwchem basis set file into the files necessary for ECCE to included it in the basis set tool. The process isn't completely automatic, but I also believe that it shouldn't be to...
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  • 13
    RSAT

    RSAT

    A script to perform SAT attacks on RSA

    SAT solvers are being used more and more in partial key exposure attacks. The scope of this script is to show that SAT solvers can be used in partial key exposure attacks of RSA with very good results.
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  • 14
    latexdiff is a Perl script, which compares two latex files and marks up significant differences between them (i.e. a diff for latex files). Various options are available for visual markup using standard latex packages such as "color.sty".
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  • 15

    ReferenceFree

    Scripts for reference free genomic analysis

    These are Python scripts plus C/C++ programs for automating the reference free genomic analysis described in: Kua C-S, Ruan J, Harting J, Ye C-X, Helmus MR, et al. (2012) Reference-Free Comparative Genomics of 174 Chloroplasts. PLoS One 7(11). http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0048995 Analytical concept conceived by CHCannon and CSKua. Original script written in Mathematica by CHCannon.
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  • 16
    A simple python script for aquarists that figures tank volume, salinity, converts temp & volume, and calculates substrates based on their specific gravity.
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  • 17

    Dress Up RNA seq

    End-to-end automated pipeline of RNA seq packages for an HPC system

    The purpose of DressUp is to create an end-to-end RNA seq pipeline in which all of the steps of analyzing data from an Illumina sequencer is done in one step in an HPC environment. RNA seq programs included are TopHat, CuffLinks, CuffDiff, CuffMerge, FastQC, and trimming using the FastX toolkit. DressUp facilitates RNA seq programs by streamlining various packages into a single script. That script executes the RNA seq programs on a batch cluster system. Upon execution of the script, jobs...
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  • 18
    BUHO

    BUHO

    BUHO identifies cells and high-contrast cellular objects

    BUHO is a MATLAB script for the identification of cells and high-contrast cellular objects according to their similarity to prototype objects
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  • 19
    Decision Table Preprocessor

    Decision Table Preprocessor

    Ccide is a Decision Table preprocessor.

    Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other...
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  • 20
    Gnuplot2TightPDF

    Gnuplot2TightPDF

    Python script that produces a tight pdf from gnuplot with psfrag text.

    Gnuplot is a widely known script based free plotting program. This script (gpt2pdf) makes it possible to generate pdf figures with 2D LaTeX maths on top of it by including psfrag replacements directly as comments in the gnuplot file. The resulting pdf file doesn't contain any extra white-spaces around it and as such can be comfortably included in any (pdf)LaTeX file. Requires: Python 2.4 - 2.7, LaTeX and the system commands ps2epsi and epstopdf which comes in with any ghostscript...
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  • 21

    zephyr

    Experiment automation

    Zephyr is a script-driven experiment automation program that works various measurement instruments and actuators. It supports instruments from Agilent, Eco Physics, ICS Electronics, Keithley, Omega, Teledyne and other manufacturers. The script language is XML-based. Syntax highlighting is available. The source code is included in the distribution. Contact the project admin to get SVN access.
    Downloads: 1 This Week
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  • 22

    RICmerge

    Improved Isobaric Label Reporter Ion Assignment

    This script and underlying data are in support of the manuscript entitled "Improved reporter ion assignment of raw isobaric stable isotope labeled LC-MALDI-TOF/TOF MS/MS spectral data for quantitative proteomics". Authors: Thomas Jakoby, Andreas Tholey and Bart H.J. van den Berg* * = corresponding author bvdberg@live.com
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  • 23

    qpure

    Tool to assess tumour sample cellularity from SNP arrays.

    qpure is an R script that uses copy-number and B allele frequency data from Illumina Omni 1M genotyping (SNP) arrays to assess the tumour content (cellularity) of cancer tissue samples.
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  • 24
    Where In the World Have You Been?
    A PHP script with maps of the World, China, Canada, USA, India, Africa and Europe that allows the user to select the countries, provinces or states by clicking on them or selecting a checkboxes. Selection causes the entity to turn a default color which contrasts with defaults colors of all bordering countries. Thus a patchwork is made to show the history of countries, states or provinces traveled. Added features allow users to download their maps, to blow them up to posters of any...
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  • 25
    this script is to visualize the coordinates data. the input is ncbiblast tabular format or a simple coordinates file. output is a png graph file
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