Search Results for "program" - Page 31
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Showing 1879 open source projects for "program"
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Linear Program Solver
Solve linear programming problems
Linear Program Solver (LiPS) is an optimization package oriented on solving linear, integer and goal programming problems. The main features of LiPS are: ● LiPS is based on the efficient implementation of the modified simplex method that solves large scale problems. ● LiPS provides not just an answer, but a detailed solution process as a sequence of simplex tables, so you can use it for studying/teaching linear programming -
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Ellipt2d is a finite element program for solving second order, real and complex, two-dimensional elliptic problems with user-defined operators. Because Ellipt2d is written in Python, the code can easily be adapted for specific problems.
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illustrative_progs
collection of illustrative programs:small games, simulators: C, Matlab
a collection of small and medium-sized simulation programs that I made explicitely for dydactic and/or documentation purposes. Browse the files, don't click on widnload because there are multiple zips!! All are related to rigidbody dynamics used to make vehicle simulators in the simplest way. Other types of programs may figure too: Snake or Tetris in C for showing the C programming style opted for the other, more specific programs. Possibly this is a link for supplying material to some... -
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gcr_convert
converts cosmic-ray files from GALPROP for viewing / plotting.
The GALPROP program (http://galprop.stanford.edu) computes cosmic-ray propagation in the Galaxy, in 2D or 3D. The ouput cosmic-ray distribution is in the form of FITS files which however are not convenient for viewing or plotting with the standard ftools program fv, since the files have 4 or 5 dimensional arrays (due to the momentum and species axes) while fv handles only 3 dimensional arrays. -
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Unsupervised TXT classifier
Classify any two TXT documents, no training required - JAVA
This program is made to address two most common issues with the known classifying algorithms. First, over-training and second, shortage of data for a training of categories. Instead, each TXT file is a category on its own, rather than an assigned category. In a way, this is similar to clustering but not really a clustering algorithm since there is some training involved. -
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Const-Calc
Construction Calculator
...Currently it incorporates for units; feet, inches, feet and inches, square feet, square inches, square yards, cubic feet, cubic inches, cubic yards, and plain decimal. For operations you can add, subtract, multiply, and divide. You can also use () for grouping. The program uses a GUI. My future plans include incorporating; a command line interface, figuring roof slopes, rafters and stairs. -
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LMFD
Lattice-based Multi-Fluids Dynamics;LBM for Gas-solid Two-phase Flows
LMFD ( Lattice-based Multi-Fluids Dynamics) is a multiphase flow simulator in framework of lattice Boltzmann method (LBM). It is a program for the modeling and simulation of multiphase flows (mainly gas-solid two-phase flows) at different levels, including macroscopic two-fluid model (TFM), mesoscopic discrete particle simulation (DPS) , and microscopic direct numerical simulation (DNS) . -
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galprop_skymap_convert
Convert galprop skymaps to standard healpix
...GALPROP outputs a spectrum per HealPix pixel, while Aladin requires each energy to be stored as a column. A conversion is required to make GALPROP skymaps viewable in Aladin. This program performs this conversion, outputs both the original energy bins and energy-integrated spectra, and in addition convolves with a user-defined Gaussian both in energy bins and energy-integrated. Also outputs the spherical harmonic decomposition as HealPix, per energy bin. There is also an option to divide by a second HealPix file, for example to give intensity if file 1 is counts and file 2 is exposure, to give intensity. ... -
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SphereSim
Physical simulation of particle movements
Physical simulation of particle movements. The computer program SphereSim simulates and animates the behavior and the movement of particles in a space. By forces (such as gravity in a particular direction and between the particles, repulsion of the particles against each other and from the walls, Lennard-Jones-Potential between particles) different physical effects in particle groups are calculated and shown, such as the Brownian motion. -
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mojo
mojo provides fast analyzes for your business processes
mojo is a standalone software and library for the fast analysis of business processes. Because of its lightweight architecture and its implementation in Java, it can be used as extension in your program, e.g., business process designer. It provides new researched compiler-based analysis techniques which supports very good failure location. The software can be used under the GNU Lesser General Public License (LPGL): http://www.gnu.org/licenses/lgpl-3.0.txt -
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EP-Quick
EP-Quick is a simple program that creates an EnergyPlus input file.
EP-Quick is a simple program that creates an EnergyPlus input file. You may use EP-Quick to create an input file for a building, without HVAC, using simple templates for the shape and zone layout. EP-Quick is an easy to use interface for EnergyPlus that provides a way to generate input files quickly. The software is no longer being maintained and is available for free. -
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compare-results
Program comparing Simulation Results for the SBML TestSuite
Compare SBML Test Suite Results =============================== The [SBML Testsuite](http://sbml.org/Facilities/Online_SBML_Test_Suite) allows developers of ODE based simulators to test their implementation against a large number of test cases that test a wide aspect of the [SBML Specifications](http://sbml.org/Documents/Specifications). While implementing my simulator [RoadRunner](http://roadrunner.sf.net) I wanted to be able to compare it using a wider range of parameters: -... -
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guiLiner provides a representation of another program's options and information, enabling one to run a command line program directly from a GUI. In other words, guiLiner creates a GUI for almost any command-line program.
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Dosematic3
Software for aberration dosymetry
Objective: The program is being developed for three main purposes: A. Dose assessment after acute whole body exposure. B. Dose assessment in partial body exposure C. Dose assessment after protracted and fractioned exposure 2. Applicability The following DNA lesions can be investigated with the help of the program: A. Dicentrics B. γ-H2AX foci C. -
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ConoSorter
A Large-scale Cone Snail Transcriptome/Proteome Analysis Program
ConoSorter is a high-throughput standalone program that implements regular expressions and profile Hidden Markov Models (pHMMs) for large-scale identification and classification of precursor conopeptides into gene superfamilies and classes based on the ER signal, pro-, and mature conopeptide regions generated from raw next-generation transcriptomic or proteomic data. ConoSorter also generates a set of relevant additional information (frequency of protein sequences, length, number of cysteine residues, hydrophobicity rate of N-terminal region) and automatically searches ConoServer database to allow the user to assess the reliability and relevance of the results and to aid the identification of new conopeptide superfamilies and classes. -
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spdc
simulation program for distributed circuit
This is a simulator for 3D distributed circuit based on GNU Octave. It reads a netlist describing distributed circuit parameters, stimuli, analysis types (op, ac, tran), and output controls (plot, plot3). It can also export distributed circuit to Ngspice netlist and import the corresponding Ngspice simulation result. -
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TxEngine is an embedded controller engine designed to allow one to make supervision & control program that fit in embedded systems. Include a modular design with native support for Modbus RTU, timers, threads, linked lists
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CH5M3D
HTML5 program for drawing and editting molecular structures
This program uses a combination of HTML5 and javascript to interactively draw and edit 3-dimensional structures of small molecules. While several useful web pages are included that require no modification, library calls are documented and examples provided to show how more advanced web pages can be created. A paper describing this program is available at the Journal of Cheminformatics (http://www.jcheminf.com/content/5/1/46). -
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Systems Glycobiology
Glycosylation Network Analysis Toolbox (GNAT)
...The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. For information about GNAT installation and usage, please see the GettingStarted.pdf file enclosed in the package. To cite GNAT: [1] Gang Liu, Apurv Puri and Sriram Neelamegham, Glycosylation Network Analysis Toolbox (GNAT): a MATLAB based environment for systems glycobiology, Bioinformatics 2013 29: 404-406 -
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Chemical Reaction
Balance chemical reaction and compute material balance
This Python program is used to balance a chemical reaction and to compute the material balance. Furthermore, it's able to check molecules and to write the condensed strutural formula from the name of an organic molecule. (Those both functionalities are still limited.) -
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This is a set of spectral models for use in the astronomical X-ray spectral modeling program XSPEC. The models calculate X-ray emission line Doppler profiles from the winds of OB stars.
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Snp Viewer
A program for visualising Affymetrix SNP array data
A program for visualising Affymetrix SNP array data for identification regions of homozygosity. Written to aid autozygosity mapping and aid the discovery of potential disease loci. -
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An application programming (API) and graphical user interface (GUI) to facilitate the use of PENELOPE's program PENEPMA.
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ORIPA S
A drawer for origami crease pattern
... - while pasting, select a point on pattern to be matched against destination point. - Some considerable bugs are fixed (i.e., wrong undo behavior on ORIPA v0.35). This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. -
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FishingCNV
Copy number variation (CNV) detection in exome sequencing data
FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases.