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  • Run Any Workload on Compute Engine VMs Icon
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  • 1
    KMC-KaiC

    KMC-KaiC

    Kinetic Monte Carlo simulation of the in-vitro Kai Circadian clock

    ...The application of the code is described in our article titled "A Thermodynamically consistent model of the post-translational Kai circadian clock", which is freely available at the open access journal PLOS Computational Biology: https://doi.org/10.1371/journal.pcbi.1005415 *UPDATE* We made a fully reversible version of our model, including the inverse reactions for ATP hydrolysis. This makes it possible to run the model at thermodynamic equilibrium. This version of the model can be downloaded under KMC_KaiC_Rev.zip. If you like to use our model for your own research, please cite our PLoS Computational Biology paper.
    Downloads: 0 This Week
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  • 2
    CalculiX Portable 4 Linux

    CalculiX Portable 4 Linux

    CalculiX Portable

    See here for newer version: https://youtu.be/mfvtWzbqNFw Portable 64-bit Linux CAE Applications to avoid Dependency hell 1) calculix portable 2) netgen opensource mesher (development) 3) dolfyn.net opensource CFD code (windows executables are included) 4) CDE: Automatically create portable Linux applications http://www.pgbovine.net/cde.html
    Downloads: 0 This Week
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  • 3
    OptFrame
    ...Since November 2017, project has been moved to GitHub (new releases will also be included here in SourceForge, but Git mainline is no longer supported here). For more information, visit: https://github.com/OptFrame/optframe
    Downloads: 0 This Week
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  • 4
    Moved to https://github.com/jmeloranta/libmeas
    Downloads: 0 This Week
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  • MongoDB Atlas runs apps anywhere Icon
    MongoDB Atlas runs apps anywhere

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  • 5
    QSS Solver

    QSS Solver

    Modeling and simulation tool for continuous and hybrid systems.

    UPDATE: ----------- This repository is no longer maintained, the new version of the QSS Solver is available at: https://github.com/CIFASIS/qss-solver
    Downloads: 0 This Week
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  • 6
    EFO

    EFO

    The Experimental Factor Ontology describing experimental variables

    *** Please note this repository is now deprecated as of January 2018. All EFO development and source code has been moved to https://github.com/EBISPOT/efo *** The Experimental Factor Ontology (EFO) available from http://www.ebi.ac.uk/efo is an application focused ontology modeling the experimental factors in ArrayExpress and constructing mappings to multiple existing domain specific ontologies. To submit new terms, features or report bugs please submit a ticket at the following: http://www.ebi.ac.uk/panda/jira/secure/CreateIssue!...
    Downloads: 0 This Week
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  • 7
    ECEbuntu

    ECEbuntu

    ECEbuntu - a customized operating system designed for ECE

    ...ECEbuntu attempts to reduce duplication of effort for building software workstations in laboratories and is intended to act as a good teaching source for a class room setting. Download ECEbuntu @ (https://www.dropbox.com/s/n7r0ny46r1sl0pv/ecebuntu_x64_2013.iso?dl=0) For Instructions Manual see Download section.
    Downloads: 0 This Week
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  • 8
    HermeneutiX

    HermeneutiX

    Your graphical tool for Syntactic/Semantic Structure Analysis of texts

    ...HermeneutiX is now part of SciToS (the scientific tool set). Starting with version 2.0.0, HermeneutiX can be found on GitHub. Please check out the release summary: https://github.com/scientific-tool-set/scitos/releases For an introduction, check out this video: https://youtu.be/uQjewyG0Ad8 PS: To run a Java application such as HermeneutiX (i.e. SciToS) you need a Java Runtime Environment (JRE). HermeneutiX is currently built to be compatible down to JRE version 6. You may download the current JRE here: http://www.java.com/en/download
    Downloads: 1 This Week
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  • 9
    LMAP

    LMAP

    Lightweight Multigene Analyses in PAML

    Maldonado E, Almeida D, Escalona T, Khan I, Vasconcelos V and Antunes A (2016) LMAP: Lightweight Multigene Analyses in PAML. BMC Bioinformatics, 17:354. doi: https://doi.org/10.1186/s12859-016-1204-5
    Downloads: 0 This Week
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  • Easily Host LLMs and Web Apps on Cloud Run Icon
    Easily Host LLMs and Web Apps on Cloud Run

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  • 10
    pteros
    !!! PTEROS DEVELOPMENT MOVED TO GITHUB !!! New project page: https://github.com/yesint/pteros New documentation page: https://yesint.github.io/pteros/ Pteros is the C++ library for custom molecular modeling and simulations codes designed for researchers, not for C++ gurus. Provides facilities for PDB, XTC and TRR files IO, powerful selections, geometry transformations, RMSD fitting and alignment, etc.
    Downloads: 0 This Week
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  • 11
    ...It is small and simple to use but with much power and versatility underneath. Features include customizable functions, units, arbitrary precision, plotting, and a user-friendly interface (GTK+). Qalculate! has now moved to GitHub (https://github.com/Qalculate). Get the latest version from http://qalculate.github.io/downloads.html.
    Downloads: 7 This Week
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  • 12
    freedomotic

    freedomotic

    Open IoT Framework

    ...Freedomotic can interact with well known standard building automation protocols as well as with "do it yourself" solutions. It treats the web, social networks and branded frontends as first class components of the system. [GITHUB REPOSITORY] https://github.com/freedomotic/freedomotic [USERS' MANUAL] http://freedomotic-user-manual.readthedocs.io/ [DEVELOPERS' MANUAL] http://freedomotic-developer-manual.readthedocs.io/ [INTERNATIONAL COMMUNITY] https://groups.google.com/forum/#!forum/freedom-domotics [ITALIAN COMMUNITY] https://groups.google.com/forum/#!forum/freedomotic-it [REPORT AN ISSUE] https://github.com/freedomotic/freedomotic/issues
    Downloads: 4 This Week
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  • 13
    ...Uno es un módulo de control para un brazo robótico autónomo que juega al tres en raya y el otro es una plataforma de definición de movimientos programados para robots bípedos Pueden verse ejemplos de ambos en: Control de robots bípedos: https://sites.google.com/site/inteligenciarobotica/home/proyectos-de-robotica/robot-bipedo https://sites.google.com/site/inteligenciarobotica/home/proyectos-de-robotica/hadron-i Control de brazo robótico jugando al tres en raya: https://sites.google.com/site/roboticarevolution/brazo-robotico-jugando-al-tres-en-raya
    Downloads: 0 This Week
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  • 14

    TX-TL modeling toolbox

    Modeling and analysis tools for the TX-TL cell-free expression system

    ...These tools include component models for simulating and analyzing biomolecular circuits, as well tools for composing circuits and creating more complex systems. NOTE: This project has been shifted to GitHub: https://github.com/BuildACell/txtlsim
    Downloads: 0 This Week
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  • 15

    PhraseComposer

    AACT FCEE Cerebral Palsy UNIVALI

    ...With some modifications, users can use numbers and arithmetic operators, figures/pictures, and others symbols to increase and diversify the software usage. University of Vale do Itajaí - ramirez@univali.br FCEE - www.fcee.sc.gov.br AACT Tools - https://aact.sourceforge.io IntechOpen Chapter - https://goo.gl/3Lzx5m
    Downloads: 2 This Week
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  • 16
    Simulation Experiment Description ML
    The Simulation Experiment Description Markup Language (SED-ML) is a formal representation aimed at encoding requirements defined in the MIASE guidelines. THIS REPOSITORY IS DEPRECATED AND MOVED TO https://github.com/sed-ml
    Downloads: 0 This Week
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  • 17
    FormRead

    FormRead

    Free OMR - OCR web sofware based on javascript and PHP

    https://formread.org FormRead is a completely free OMR (optical mark recognition) web software for scanning and grading user-filled, multiple choice forms. Create your formats with any of your office or drawing tools, scan them and parameterize their coordinates in an easy way. Once you have parameterized your form, you can print many of them, give it to your students/respondents, scan and recognize them with formread, and you can finally export the data in your preferred formats (excel, pdf, csv)
    Downloads: 13 This Week
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  • 18
    Epidat

    Epidat

    Statistical data analysis

    ...Free distribution cross-platform program for statistical and epidemiological analysis of data. Sitio web: http://www.sergas.es/Saude-publica/EPIDAT Souceforge: https://sourceforge.net/projects/epidat/ Wikipedia: https://es.wikipedia.org/wiki/Epidat
    Downloads: 25 This Week
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  • 19

    S7 Siemens PLC Trace Signals

    Free and easy software to trace, analise and log Siemens PLC variables

    ...You can watch & record in real time the state of all types of variables: - Markers - Inputs/Outputs - Timers - Counters - Databases It is written in C# and it is using Snap7 library. It should work also with S1200. Current state is stable. If you encounter any problems or you have any idea for a new feature - write a review https://sourceforge.net/projects/s7-trends/reviews/new Testing and criticism is very welcome, as well as donations. Version 1.02 Released: - Much performance improvement & Bugfixes - Chart zooming with rectangle - Import symbols in DIF format - Change Display format for variables - Save & Load variables configuration - Handling of Timers & Counters
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    Downloads: 28 This Week
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  • 20
    MYRA

    MYRA

    A collection of ACO algorithms for the data mining classification task

    ...They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values. This project is now hosted at: https://github.com/febo/myra
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    Downloads: 18 This Week
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  • 21
    EPICS Qt Framework

    EPICS Qt Framework

    Qt based GUI system for use on EPICS control systems. (Now on GitHub)

    (Now mantained on GitHub - https://qtepics.github.io/) A layered framework based on Qt for accessing Experimental Physics and Industrial Control System (EPICS) data using Channel Access (CA). Designed for rapid development of control system graphical interfaces. Initially developed by Glenn Jackson, Anthony Owen, and Andrew Rhyder at the Australian Synchrotron.
    Downloads: 0 This Week
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  • 22
    Logic Circuit Diagram

    Logic Circuit Diagram

    Build now your diagram logic circuit

    A full-client web application, practical and useful developer diagrams for the construction of the logic of a circuit, with circuit simulator, AC, DC and Transient Analysis, for your Computer Desktop. You can to export yours diagrams in pdf, png, jpg, gif and tiff. ========== Support Windows 7 and later with ia-32 or arch x64 ========== Android app: https://play.google.com/store/apps/details?id=com.ulm.droidtronics Chrome extension: http://bit.ly/29Tdvz7 Opera add-on: http://bit.ly/1igCRWQ
    Downloads: 0 This Week
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  • 23

    spectralHMM

    A spectral method for inferring selection from time series data

    ***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222
    Downloads: 0 This Week
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  • 24
    ...The special feature I've added to it is the ability to connect to WinCC over the OPC protocol. Support: andrewpham.freelancer@gmail.com, live:andrewpham.freelancer, telegram:andrewphamvn Donate me: https://paypal.me/cnavn
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    Downloads: 29 This Week
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  • 25

    Kinetic Model Builder

    GUI for building, simulating and optimizing kinetic models.

    ...A series of video tutorials are available at https://www.youtube.com/watch?v=7I2XPkdOvCg&list=PL-J_lULjiFsCPL2pkz8_tFe_aJ4Fc8a8k&index=1.
    Downloads: 0 This Week
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