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Showing 1253 open source projects for "https"
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MANTIS R Package
Multi-locus ANTIgenic Simulator R-package for multi-strain pathogens
...MANTIS is developed and maintained by the Evolutionary Ecology of Infectious Disease (EEID) research group at the Department of Zoology, University of Oxford, UK. For theoretical background please refer to 'MANTIS: an R package that simulates multilocus models of pathogen evolution' (https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0598-9 OPEN ACCESS) At the moment, MANTIS is not available on CRAN. To build a source package of MANTIS, use the script buildPackage.R To install MANTIS use 'install.packages(file.tar.gz,type="src",repo=NULL)' To test use test_V3.3_code.R Contact the main author of the publication above for further details. ... -
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Vector network Analyzer (VNA)
Save Touchstone files and load calibration kits from HP & Agilent VNAs
... * 'calkit' to upload calibration kit definitions to the VNA, including the properties of the shorts, opens and thrus. This is alpha software, and has little documentation. Contact the author, Dr. David Kirkby at https://www.kirkbymicrowave.co.uk/ drkirkby@kirkbymicrowave.co.uk for help. -
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The Disease Ontology has moved to Github. New project page: https://github.com/DiseaseOntology Disease Ontology is a stuctured controlled vocabulary originally based upon and mapped to medical billing codes. The goal of this ontology is to create a comprehensive hierachical controlled vocabulary to represent subsumptive disease relationships.
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Quantum Honeycomp
Interactive program to calculate electronic properties in graphene
...The code uses the tight binding approximation and it is able to stude in a 0D, 1D and 2D geometries, orbital and magnetic fields, intrinsic and extrinsic spin-orbit coupling, sublattice imbalance, and interactions at the mean field level. The most recent version can be found in https://github.com/joselado/quantum-honeycomp Example videos https://www.youtube.com/watch?v=8gO1yRmwgAs https://www.youtube.com/watch?v=FQlkqAW7Nhs https://www.youtube.com/watch?v=R7Kt3_DHTtM https://www.youtube.com/watch?v=tQKG_h0FaTM -
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As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
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MrBayes is a program for the Bayesian estimation of phylogeny. The project has been moved to GitHub: https://github.com/NBISweden/MrBayes
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FlexxCpu
Flexible and eXpandable Cpu simulation
...A virtual Cpu whose assembly instructions have been strongly influenced by old cpus architecture (8080, 6809, z80, 68k, etc...) Please support this project by donating to this fundraiser: ------------------------------------------- Give birth to new travel bicycles!!! https://gofund.me/2201d2a4 ------------------------------------------- -
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Ethernet POWERLINK XDD Tool Suite
Provides eclipse plugins for XDD edit, validation and OD generation.
The plugins include functionality to edit and check CN / MN XDD / XDC files against the DS311 V1.2.0 and the DS 301 1.3.0 specification. Another plugin enables the user to generate the object dictionary header file from an XDD / XDC file for the openPOWERLINK (https://goo.gl/Cg77Oi) implementation. Please note that the validation functionality works properly for Controlled and Managing Node XDD / XDC files. Please use the update site to install the plugin in your eclipse environment: http://sourceforge.net/projects/xddpluginsuite.openconf.p/files/update_site/ User Manual: https://goo.gl/hvtLAq XDD editor plugin user manual: https://goo.gl/Fo5pUQ Install via Eclipse marketplace: https://goo.gl/eAZAn9 Link to the openCONFIGURATOR parent project: https://sourceforge.net/projects/openconf/ -
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FlexibleParser_Java
Group of multi-purpose Java-converted-from-C# parsing libraries.
...AUTHORSHIP & COPYRIGHT I, Alvaro Carballo Garcia (varocarbas), am the sole author of each single bit of this code. All the contents of this repository can be considered public domain. For more information about my copyright/authorship attribution ideas, visit https://customsolvers.com/copyright/. IMPORTANT NOTE This project is a mirror of the repository FlexibleParser_Java in my GitHub account (varocarbas). Both versions are fully synchronised and immediately updated with any change. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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FlexibleParser
FlexibleParser is a group of multi-purpose .NET parsing libraries.
...AUTHORSHIP & COPYRIGHT I, Alvaro Carballo Garcia (varocarbas), am the sole author of each single bit of this code. All the contents of this repository can be considered public domain. For more information about my copyright/authorship attribution ideas, visit https://customsolvers.com/copyright/. IMPORTANT NOTE This project is a mirror of the repository FlexibleParser in my GitHub account (varocarbas). Both versions are fully synchronised and immediately updated with any change. -
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qMetro
Subway maps of the World !
...sl=ru&tl=en&u=http://pmetro.su/Maps.html (Maps have an open format and can easily be edited or created) App available for many platforms: http://qt-apps.org/content/show.php?content=146249 Also available for Symbian: http://qmetro.sf.net/mobile/ How to translate: https://sf.net/projects/qmetro/files/translation/ -
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LTL3DRA
LTL to deterministic Rabin automata translator based on LTL3BA
THE PROJECT HAS BEEN MOVED TO GITHUB, FOLLOW https://github.com/xblahoud/ltl3dra LTL3DRA is a translator of a fragment of LTL formulae to deterministic Rabin automata. It is based on the popular tool named LTL3BA written by Tomas Babiak (available at https://sourceforge.net/projects/ltl3ba/). The translation used in LTL3DRA is described in T. Babiak, F. Blahoudek, M. Křetínský, and J. -
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PLaTHEA
People Localization and Tracking for HomE Automation
...An usage tutorial for an older is provided at http://www.dis.uniroma1.it/~leotta/demos/plathea/plathea.html. If you want to use this code please cite the research paper at https://onlinelibrary.wiley.com/doi/abs/10.1002/spe.2262. -
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owfs and owhttpd
Project moved to https://github.com/owfs/owfs/
Please note that OWFS source code, and all Issue/Tickets/merge requests have now been moved to https://github.com/owfs/owfs/. Developer mailing lists will still be kept at Sourceforge. ---- OWFS -- 1-Wire file system. Use the Dallas 1-Wire and iButton chips with standard filesystem commands. Create temperature loggers. Monitor everything. OWHTTPD -- same system, only used as a light weight web server. OWFS is also ported to embedded routers, Mac OSX and Windows. -
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...Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit: http://search.maven.org/#search|ga|1|teachingbox FOR DEVELOPERS: 1) If you use Apache Maven, just add the following dependency to your pom.xml: <dependency> <groupId>org.sf.teachingbox</groupId> <artifactId>teachingbox-core</artifactId> <version>1.2.3</version> </dependency> 2) If you want to check out the most recent source-code: git clone https://git.code.sf.net/p/teachingbox/core teachingbox-core Documentation: https://sourceforge.net/p/teachingbox/documentation/HEAD/tree/trunk/manual/
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**CODE MOVED TO GITHUB: https://github.com/bitextor ** Bitextor is an application created to generate translation memories using multilingual websites as a corpus source. It downloads an entire website and applies a set of heuristics (based mainly on HTML tag structure and text block length) to find bitexts.
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...Citation: Madanecki P, Bałut M, Buckley PG, Ochocka JR, Bartoszewski R, Crossman DK, et al. (2018) High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets. PLoS ONE 13(2): e0192858. https://doi.org/10.1371/journal.pone.0192858
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JPIV
Particle Image Velocimetry
JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/ -
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chemfiles
Modern library for chemistry file reading and writing
...Chemfiles provides an interface to access this information which is - unified: the same code will work with all the supported formats; - simple: the interface is easy to use and extensively documented. This is only a mirror of the main repository, development of chemfiles happens on Github, at https://github.com/chemfiles/chemfiles/ -
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Object Oriented Streetmap
C# class library for processing OpenStreetMap data
This is a class library written in C# for processing OpenStreetMap XML file extracts into a SQLite database for routing with different vehicle types and restrictions. Before rating or contributing please see the README file for a more complete summary and a list of todos. -
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The Large Time/frequency Analysis TB
LTFAT is a Matlab/Octave Fourier, time-frequency and wavelet toolbox.
******************************************************* LTFAT was moved to Github https://github.com/ltfat. ******************************************************* -
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pySBOL
SWIG-Python wrappers for libSBOL
pySBOL is a SWIG-Python wrapper around libSBOL, a module for reading, writing, and constructing genetic designs according to the standardized specifications of the Synthetic Biology Open Language (SBOL). This page provides binary installers for Windows operating system for Python 2.7 and 3.6. For installation instructions, visit: https://pysbol2.readthedocs.io/en/latest/installation.html For full documentation, visit: https://pysbol2.readthedocs.io/en/latest/index.html -
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NOTE: For latest version, please visit https://github.com/ispasic/FlexiTerm. FlexiTerm is an open-source software tool for automatic term recognition. FlexiTerm uses a range of methods to neutralise the main sources of term variation. FlexiTerm is robust enough for less formally structured texts, such as those found in patient blogs or medical notes.
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The project development has been moved on GitHub https://github.com/pcb2gcode/pcb2gcode The GUI for pcb2gcode can be found here https://github.com/pcb2gcode/pcb2gcodeGUI pcb2gcode is a command-line tool for isolation, routing and drilling of PCBs that provides full support for both single- and double-sided boards. For more information, see http://sourceforge.net/apps/mediawiki/pcb2gcode/
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Fraqtive
Generator of the Mandelbrot family fractals
...It generates high quality anti-aliased images and renders 3D scenes using OpenGL. It allows real-time navigation and dynamic generation of the Julia fractal preview. Website: https://fraqtive.mimec.org/
