Search Results for "split" - Page 2

A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper

...It requires a BAM alignment file from an RNA-seq experiment and an annotation file in GTF format detailing the location of the exons in the genome. It uses paired end reads where one mate maps to one exon and the other mate to a different exon and/or split reads spanning exon exon junctions to count “links” between two exons. When there are overlapping exons, these are grouped into “exon groups” and unique portions of each exon in an exon group are identified which are used when assigning reads to an exon. The link counts ascertained from unique regions are normalized with the probability of observing such a link given the insert size distribution which is referred to as link coverage. ...

mdl is a system of formal mathematics, which is split into 2 levels: a high-level language for human-readable representation of math and low-level language for trustworthy verification. Currently, as low-level language mdl uses metamath system.

LaserFoam performs simulations of laser pulses using an adaptive split step Fourier method to solve the generalized nonlinear Schrödinger equation. It provides a graphical environment to run and visualize the results.

NoBlast provides a new extended user friendly csv output format and offers an option to correct the statistics when split databases are used for NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn and Tblastx).

A disk based production quality RTree based upon Guttman’s quadratic split algorithm having following features: Buffering with dirty write, Index joins, Tree Seeding, Window and NN queries, Runtime STR Packing capability, Completely Thread safe.

Digital Image Processing Toy process in real time live images captured from video4linux compatible hardware. Remove background from captured tv camera images, invert image colors, split rgb field, display coor istograms, etc.... Strong changes in light i

Acre calculates growing-space or stand-density of trees and creats pictures of it. It can also be used to calculate weighted Voronoi-Diagrams (splits up an area to the neares point or to the point with the greatest influence at a certain place).

TeXPerfect plans to be a cross-platform, extensible, user-friendly yet expert-tunable visual TeX implementation. The most important feature will be a split screen (inspired by WordPerfect(R) Reveal Codes) showing the underlying TeX code.

bjsim is a blackjack simulator, designed to test various basic (noncounting, total, noncompositional) strategies under various conditions: number of decks, game rules (double after split, dealer hitting soft 17, etc.).

Pari-Distributed is a mostly Erlang framework that lets you split up trivially parallelizable loops in GP across multiple nodes. Its goal is to dynamically manage a list of active nodes and split up work units fairly across remote nodes.