Showing 81 open source projects for "python script writer"

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  • 1
    Provides auxiliary tools for the Monte Carlo particle transport code FLUKA (www.fluka.org).
    Downloads: 0 This Week
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  • 2

    QG fantasy maps plugins

    Some pythons plugins to enhance fantasy maps creation with QGis

    QGis permit the use of python script to handle maps. Here are some python code ready to use and modify, and some associated samples.
    Downloads: 0 This Week
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  • 3
    polypy
    **(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
    Downloads: 0 This Week
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  • 4

    PyBrella

    Python script to automate umbrella sampling with AMBER

    PyBrella is a script designed to automate the umbrella sampling process, using the AMBER molecular dynamics package.
    Downloads: 0 This Week
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  • 5
    CONTIGuator
    CONTIGuator is a Python script for Linux environments whose purpose is to speed-up the bacterial genome assembly process and to obtain a first insight of the genome structure using the well-known artemis comparison tool (ACT).
    Downloads: 0 This Week
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  • 6

    UniPyRange

    Tool to fetch protein/DNA truncation constructs from Uniprot DB

    Very simple python script which saves you the pains of counting the amino acids/DNA bases in fasta files from the Uniprot and NCBI RefSeq Database (1, 2). Lets say you want the amino acid sequence of range 128-387 from a 1000 amino acid protein - this script will help you to avoid counting mistakes by just showing you the specified sequence in amino acids and coding DNA base pairs (ideal for amplification primer design) of a specified Uniprot ID
    Downloads: 0 This Week
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  • 7
    This script can convert raw diffraction images to JPEG files. Support ADSC, MarCCD, Mar345, RAXIS and PILATUS, and can be run on Windows, Linux and Mac OS X.
    Downloads: 0 This Week
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  • 8
    mitoMaker

    mitoMaker

    mitoMaker - a mitochondria assembly and annotation script

    mitoMaker is a pipeline script developed to simplify the assembly and automatic annotation of mitochondrial genomes, based on raw NGS reads and an optional target reference. mitoMaker calls well known assemblers and algorithms, such as SOAPdenovo, MIRA and blast+ and parses their results providing easily readable outputs, such as FASTA, GENBANK, SEQUIN, PNG and others. General pipeline: 1-iterative De Novo assembly, with different k-mer values, trying to assemble a build that matches...
    Downloads: 0 This Week
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  • 9

    Latest on Arxiv

    Parse the latest Arxiv RSS stream and get your institute preprints

    ...I provide this software as a demonstration on how we do it at the Kapteyn Astronomical Institute. The script is run daily as a cron command. Feel free to take and modify this code any way you want. But if you are using it, I'd love to at least here from you and know I didn't put this up for nothing. The program has no major prerequisites, except the Python package pyPdf. It is build for Python 2.6.x series, but will probably work on many others as well.
    Downloads: 0 This Week
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  • 10

    Erda

    Workflow automation of Thomas networks

    This script is supplementary to the article "Time series dependent analysis of unparametrized Thomas networks" and performs the workflow steps described in section 7.
    Downloads: 0 This Week
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  • 11
    bladedesigner
    The BladeDesigner package is a CAD/CAE tool providing classes for turbomachine blade design. So far it is optimized to be useful in the aerodynamic design process. It comes with a GUI but is most powerful with user defined python scripts.
    Downloads: 1 This Week
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  • 12

    mitoMaker

    mitoMaker - a mitochondria pipeline wrapper script

    Mitomaker is a pipeline wrapper, result analyzer and automated annotator, written in Python v2.7, that, with the help of other programs, builds, analyzes, looks for the best build and annotates target genomes (such as mitochondria and cloroplast). It could be used with other targets, such as specific genes, or transcriptomes, even though that is not it's primary goal, nor thoroughly tested. After various attempts to build different mitochondrial genomes in the lab I studied, a general...
    Downloads: 2 This Week
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  • 13

    dl141th

    Configure / read out the DL-141TH data logger

    The DL-141TH temperature/humidity data logger comes with a proprietary software which has a quite large footprint and is only available for Windows, but not for Linux. This project provides - a description of the USB/serial protocol - a python script to configure / read out the DL-141TH data logger which can be used at least from Windows and Linux
    Downloads: 0 This Week
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  • 14
    calc2booktab.latex

    calc2booktab.latex

    Script for OpenOffice/LibreOffice to convert tables to Latex-Code

    ...The soruceforge page won't get any bugfixes, please use the github repo if you want to try this macro. -------------------------------------------------------------------------- A Python extension for OpenOffice/LibreOffice to convert selected cells to LaTeX-Code. Its similar to Calc2Latex, but typographic formatting is more advanced (numeric columns, dcolumn-package, booktab-package) Script is tested and working with... ... Ubuntu 12.04 64 bit / LibreOffice 3 ... Windows 7 64 bit / LibreOffice 3* ... Arch Linux 64 bit / LibreOffice 4.2 *Encoding problems with special characters (non-unicode) on Windows reported.
    Downloads: 0 This Week
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  • 15

    portas

    Pequeno script em Python para provar o problema de Monty Hall

    O jogo consiste no seguinte: Monty Hall (o apresentador) apresentava 3 portas aos concorrentes, sabendo que atrás de uma delas está um carro (prémio bom) e que as outras têm prêmios de pouco valor. Na 1ª etapa o concorrente escolhe uma porta (que ainda não é aberta); De seguida Monty abre uma das outras duas portas que o concorrente não escolheu, sabendo à partida que o carro não se encontra aí; Agora com duas portas apenas para escolher — pois uma delas já se viu, na 2ª...
    Downloads: 1 This Week
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  • 16
    PyRadMon

    PyRadMon

    Automated reporting of Geiger Muller counter readings to RadMon.org

    This project includes several Python and bash scripts designed to connect Geiger Muller counters to report their results to RadMon.org. Soon the script will also feature local logging, graphing and alerting. Just because the Cold War is "over" does not mean that there is no more threat of a radiological attack. In fact, the U.S. Homeland Security Council lists the "Detonation of a 10 Megaton Improvised Nuclear Device" as "Scenario #1" among the top 15 threats to American security. ...
    Downloads: 0 This Week
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  • 17

    GeekCode

    Python script for GC

    GeekCode Generator. Object - oriented python script, which allows You to generate GeekCode Block from natural english language symbols. All instructions are in program. Enjoy and please report bugs or anything else for improve this script. This is my first full object-oriented program.
    Downloads: 0 This Week
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  • 18

    Tag-find

    a python script to recognize specific sequence of tags

    Tag-find is a python script developed to clean up reads from a specific 12 nucleotides long tag sequence used during the cDNA library preparation for RNA-seq experiments.
    Downloads: 0 This Week
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  • 19
    openfablab

    openfablab

    Open Source FabLab Project

    Software script assembly to be executed on cnc machines and robots to build, maintain and replicate open source fablab. Here software meets hardware.
    Downloads: 1 This Week
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  • 20

    Language Constructor

    Complete tool for constructing/manipulating languages in digital form

    With this tool you can easily design a new language, digitize an existing one or incrementally reconstruct an ancient language. It allows for free experimentation of all aspects of the language, so it does not have to be made consistent on paper first. You can edit script, syntax, grammar, morphology, lexicon and phonology, as well as write documents in the language, as it might be too complex to be handled by current font technology. The information is stored in xml format for easy...
    Downloads: 0 This Week
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  • 21
    SDEdumper

    SDEdumper

    Copy multiples feature classes in ArcSDE to a local file geodatabase

    Why use it? You can create your own Python script using model builder, but you have to modify the script everytime you want to dump different tables. Using this script you only need to have a CSV with all the table names, that’s it. Purpose: It can be used as an archival and historical database It will make you ArcSDE database portable and shareable
    Downloads: 0 This Week
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  • 22

    nwbas2ecce

    nwbas2ecce converts nwchem basis set files to the ECCE format

    The basis sets included with ECCE have -- as far as I can tell -- not been updated for many years. In addition, many of the newer basis sets that come with nwchem aren't included, such as the def2- series. nwbas2ecce is a python script that aims to automate as much as possible of the conversion process of a nwchem basis set file into the files necessary for ECCE to included it in the basis set tool. The process isn't completely automatic, but I also believe that it shouldn't be to avoid stuff-ups -- however, the amount of manual editing is kept to a minimum. ...
    Downloads: 0 This Week
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  • 23
    RSAT

    RSAT

    A script to perform SAT attacks on RSA

    SAT solvers are being used more and more in partial key exposure attacks. The scope of this script is to show that SAT solvers can be used in partial key exposure attacks of RSA with very good results.
    Downloads: 0 This Week
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  • 24

    ReferenceFree

    Scripts for reference free genomic analysis

    ...Original script written in Mathematica by CHCannon.
    Downloads: 0 This Week
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  • 25
    A simple python script for aquarists that figures tank volume, salinity, converts temp & volume, and calculates substrates based on their specific gravity.
    Downloads: 0 This Week
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