Search Results for "pdf tool python" - Page 2
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Showing 390 open source projects for "pdf tool python"
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Gwyddion
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis. -
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CBFLIB is a library of ANSI-C functions providing a simple mechanism for accessing Crystallographic Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. The CBFLIB API is loosely based on the CIFPARSE API for mmCIF files.
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TabuVis
An Interactive Visualisation for Tabular Data
...The project is available at: http://staff.scem.uws.edu.au/~vinh/projects/TabuVis/ Related publications: https://www.sciencedirect.com/science/article/pii/S2468502X20300358 https://dl.acm.org/doi/pdf/10.1145/2968220.2968248 https://link.springer.com/content/pdf/10.1007/s11432-013-4870-1.pdf https://dl.acm.org/doi/pdf/10.1145/2397696.2397705 -
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KherveBook
Computational notebook mixing Python, Markdown, LaTeX, JS and Sheet
KherveBook is a Jupyter-inspired computational notebook built as a native PyQt5 desktop application. A single document mixes five kinds of cell: runnable Python code, formatted Markdown, typeset LaTeX, JavaScript/HTML, and live spreadsheets. Python runs in an in-process kernel with NumPy, SciPy, pandas and Matplotlib preloaded. A side AI chat that knows the API of KherveBook that can write your Python program for you. Spreadsheet cells evaluate A1-style formulas in Python; LaTeX cells compile full documents with tectonic; JavaScript/HTML cells render in an embedded web view (D3, Plotly, canvas); and images or PDF pages import as cells. ... -
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ChemCanvas
Chemical structure drawing tool
This is targeted to be the most intuitive opensource 2D chemical drawing tool. You can draw organic chemical structures and reactions very easily and quickly. Available to download for Windows and Linux (AppImage, Flatpak, Snap) -
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Avogadro
An intuitive molecular editor and visualization tool
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture. -
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IP-XACT 2009/2014 Platform
Smart GUI/Commandline tools to create IP-XACT( 2009/2014) files
...One can create IP-XACT Component, Design or Registers by importing Ip in System Verilog/Verilog-95/VHDL, instantiate Bus Interfaces with proper port maps and attributes as needed. Smart GUI to create IP-XACT Registers, Memory Maps, Address Blocks for IP- has feature to import XLS or Verilog . It has Tcl/Python API support. ipxact2verilog - Generate Verilog module from IP-XACT definition ipxact2vhdlentity - Generate VHDL entity from IP-XACT Component definition verilog2ipxact - Generates IP-XACT definition from Verilog modules vhdl2ipxact - Generates IP-XACT definition from VHDL source ipxactcoherencycheckerverilog / ipxactcoherencycheckervhdl - Validates IP-XACT Component definition with RTL validateipxact - IP-XACT Linting tool... -
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CERCA
CERCA – Citation Extraction & Reference Checking Assistant
CERCA is an open-source research tool that supports the verification of bibliographic references in scientific manuscripts. It extracts references from PDF files and checks their existence and consistency against authoritative metadata sources, producing explainable diagnostics, audit logs, and reproducible reports. It is intended for: - Researchers performing final manuscript checks - Reviewers assessing reference consistency - Editors supporting editorial quality control - Meta-research and reproducibility workflows CERCA is an experimental tool. ... -
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A quantitative finance C++ library for modeling, pricing, trading, and risk management in real-life. A cross-platform free/open-source tool for derivatives and financial engineering.
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SDF Merger
Desktop application for merging multiple SDF files into a single SDF
SDF Merger is a Python-based desktop application designed for chemists and researchers working with molecular data. The tool provides an graphical interface to merge multiple SDF files containing chemical structures and properties into a single consolidated file. Key Features: 1. User-Friendly GUI: Clean, professional interface with corporate branding 2. -
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MetRFinder
Detection of Heavy Metal Resistance Genes from Bacterial Proteomes
MetRFinder is a standalone GUI-based bioinformatics tool developed in Python for rapid identification of heavy metal resistance genes from bacterial proteomes. The software integrates DIAMOND BLASTP with BacMet Experimental and BacMet Predicted databases to enable high-throughput screening of protein FASTA files. Users can analyze single or multiple bacterial isolates through an intuitive graphical interface without requiring command-line expertise. -
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OdooPLM
A Full PLM system based on odoo
OdooPLM - full open source PLM built on Odoo. 3D models, 2D drawings, BOMs, revisions and documents, versioned. LGPL-3, since 2010 by OmniaSolutions, Official Odoo Partner. YOU DO NOT NEED ODOO AS YOUR ERP. Run it as a standalone PLM beside your existing ERP - Odoo is the platform, not the commitment. Already on Odoo? PLM and ERP share one database. THIS PAGE = WINDOWS CAD CONNECTOR. One build works with every Odoo version (v11+). Download: /files/Client/Stable/ CAD: SolidWorks,... -
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MolPrep
RDkit-based Molecule Optimization Tool (CLI) in python.
MolPrep is a powerful utility application designed to streamline the preparation and refinement of molecular geometries. With the help of RDKit, this tool enables users to load, clean, standardize, and optimize molecular structures effortlessly. Its robust design ensures scalability and efficiency, making it ideal for chemoinformatics workflows. -
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A... -
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Repeater-START
Showing The Amateur radio Repeaters Tool
Repeater-START (Showing The Amateur Repeaters Tool) is an app to view nearby ham radio repeaters. It runs on Windows, Android, Ubuntu Linux and Raspbian for Raspberry-pi, Librem Phone, Pinephone/Manjaro Linux etc. -
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Robean
Rodent Neurobehavioral Analysis Software
Robean is a standalone freeware application for automated rodent neurobehavioural analysis. The software provides an intuitive graphical interface for analysing Morris Water Maze, Elevated Plus Maze, and Open Field Test experiments from prerecorded videos or live camera feeds. Robean integrates arena definition, zone management, centroid tracking, trajectory visualization, occupancy heatmap generation, automated PDF reporting, and batch study summaries within a single desktop application... -
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Fastq-Fasta Converter
A bioinformatics tool that converts Fastq into Fasta
Fastq-Fasta Converter is a desktop application that converts Fastq files into Fasta files. -
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ANYstructure
GUI based steel structure calculation and optimization tool.
...Pressures on external hull (or any other generic location) is defined by specifying equations. You can optimize single plate/stiffener field or multiple. PYTHON: PIP install ANYstructure Code: https://github.com/audunarn/ANYstructure -
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CircuiTikZ Generator
This software is a tool for designing electronic circuits using LaTeX.
This software is a tool for designing electronic circuits using LaTeX. With an intuitive graphical interface, you can create complex circuits quickly and easily, while the LaTeX code generator translates your designs into code compatible with the LaTeX circuitikz library. -
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RetroScheme- Get Your Retrosynthesis
- RetroScheme is used for molecule sketching and retrosynthesis
RetroScheme was specifically designed to help Chemists in knowing potential starting material through retrosynthetic analysis. The App is basically a GUI wrapper for the library Aizynthfinder from Astrazeneca.. - The App is coupled with molecular sketching tool to sketch your compound - This was made to be easy for the user and can be used endlessly to assist in potential new drug synthesis -
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xLaDe
A Lean 4 Ecosystem Framework!
xLaDe is a simple Python-based CLI tool built for executing and preserving Lean 4 projects. It is an ecosystem-level tool, which records the toolchain and other metadata of projects and allows the reconstruction and rebuilding of that exact environment later. Lean 4 undergoes rapid development, which can introduce backward-compatibility issues. This problem becomes more difficult as the versions accumulate over time. xLaDe is built to mitigate the practical issues of backward-compatibility problems and improve ecosystem-level tooling for the Lean 4 theorem prover. ... -
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Tellurium
Model, simulate, and analyze biochemical systems using one tool.
Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support. -
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CiteFlow
Read research PDFs and organize source-linked notes and citations
Current official release: 1.2.1. Windows 10 1809+ or Windows 11 (x64). CiteFlow is a free, closed-source Windows workspace for research PDFs you already have. Read sources side by side, highlight passages, keep page-linked notes and preserve citation context. Search exact wording locally, or install an optional model for beta semantic suggestions. Optional local OCR supports scanned sources. Prepare APA, MLA, Chicago and IEEE citation drafts, then check metadata, quotations and... -
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SimFPGA
VHDL Verification and Simulation Tool
SimFPGA is a graphical user interface (GUI) tool designed to facilitate the simulation of VHDL projects. It enables users to select VHDL source files and testbenches, configure library and standard settings, and run simulations using GHDL. Additionally, it allows visualization of waveforms through GTKWave. SimFPGA elaborates the project files using GHDL and builds the VHDL project before simulating it. This ensures code verification without the need for additional compilation tools. If... -
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TOPCEE
Python GUI tool for estimating plant CAPEX, OPEX, and profitability
TOPCEE (Toyese Oyegoke Process Cost & Economic Evaluator) is a GUI-based Python application designed to assist chemical engineers, researchers, and students in evaluating the profitability of chemical/process plants. The app calculates capital and operational expenditures (CAPEX & OPEX) and provides key profitability metrics such as: **ROI (Return on Investment) **IRR (Internal Rate of Return) **NPV (Net Present Value) **Payback Period (Discounted and Non-Discounted) **Benefit-Cost Ratios Users input plant-specific values like feedstock costs, operating time, product price, and equipment cost — and the tool generates real-time visualizations and results. ...
