Showing 2657 open source projects for "sql command line"

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  • 1
    X-RIME is a open source project devoted to provide Hadoop based solution for large scale social network analysis.
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  • 2

    libirt

    The new site is at http://psychometricon.net/libirt/

    The new site is at http://psychometricon.net/libirt/ Library of functions to estimate the items and abilities from the responses of subjects to a questionnaire. The IRT models supported are the logistic model, the multivariate logistic model, the graded model and smoothing by penalization and kernel.
    Downloads: 0 This Week
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  • 3

    mirplant

    miRPlant: An Integrated Tool for Identification of Plant miRNA

    please cite: An J, Lai J, Sajjanhar A, Lehman ML, Nelson CC: miRPlant: an integrated tool for identification of plant miRNA from RNA sequencing data. BMC bioinformatics 2014, 15(1):275. We will create index for you if you tell us your interested plants (j.an@qut.edu.au).
    Downloads: 3 This Week
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  • 4

    ParBiBit

    Parallel tool to search biclusters on binary datasets

    ParBiBit is a parallel tool to accelerate the search of biclusters on binary datasets, especially useful for gene expression data. This tool receives as input the expression values of n genes and m samples in a file with ARFF extension and returns a file with the biclustering information.
    Downloads: 0 This Week
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  • 5
    Mavscript

    Mavscript

    Calculations in a text document

    Mavscript allows the user to do calculations in a text document. Plain text, LaTeX and OpenOffice Writer files (.odt) are supported. The calculation is done by the algebra system Yacas (default), Jasymca or by the Java interpreter BeanShell.
    Downloads: 3 This Week
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  • 6
    scnu

    scnu

    Fortran codes for SCNURS method - Side Cut Non-Uniform Residual Stress

    SCNURS - Side Cut Non-Uniform Residual Stress measurement method for plates, - is a destructive RS measurement method developed in Moscow, Russia and later in Bristol, UK. The method is specifically designed for the measurement of highly non-uniform RS fields, including discontinuities, in plates. This project collects all codes which implement forward and inverse solution to the RS problem. The codes are in modern Fortran with OpenMP. The codes are distributed under 2-clause BSD...
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  • 7
    finds exact gain, directivity and input impedance of Yagi or log-periodic antennas (planar symmetric array of cylindrical dipoles, many driven elements) for a range of specified frequencies, integrates 2D for segments on the same element, moment method
    Downloads: 0 This Week
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  • 8

    Presage

    the intelligent predictive text entry platform

    Presage (formerly Soothsayer) is an intelligent predictive text entry system. Presage generates predictions by modelling natural language as a combination of redundant information sources. Presage computes probabilities for words which are most likely to be entered next by merging predictions generated by the different predictive algorithms. Presage's modular and extensible architecture allows its language model to be extended and customized to utilize statistical, syntactic, and semantic...
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    Downloads: 202 This Week
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  • 9
    scriptLattes is an open-source system to create academic reports of groups based on curricula vitae of the Brazilian Lattes Database.
    Downloads: 3 This Week
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  • 10

    MPICorMat

    Parallel tool to construct correlation similarity matrices

    MPICorMat is a parallel tool to construct correlation similarity matrices as part of the procedure to generate gene co-expression networks. This tool takes as input a matrix with the expression values (a float value) for different genes observed from several samples. It is a parallelization of the first module of the RMTGenNet tool (https://github.com/spficklin/RMTGeneNet). RMTGeneNet users can exchange this CCM module by MPICorMat, benefit from its fast computation to generate the...
    Downloads: 0 This Week
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  • 11
    PF_HP

    PF_HP

    Prediction of proteinfolding in 2D HP model

    Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings). Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die...
    Downloads: 0 This Week
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  • 12
    lottie vectors

    lottie vectors

    Create, display and process 2D vectors in a 3D window.

    ...This could be a common math symbol or greek letter, start/end signposts, or a number of the position either from the begining or after a reset. After all the information has been loaded for your dataset. Either passed over the command line, or as a text file. Lottie Vectors displays inside a figure that you can resize, rotate and turn 2D positions into a 3D picture.
    Downloads: 0 This Week
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  • 13

    CIF2Cell

    Generating cells for electronic structure calculations from CIF files

    CIF2Cell is a tool to generate the geometrical setup for various electronic structure codes from a CIF (Crystallographic Information Framework) file. The program currently supports output for a number of popular electronic structure programs, including ABINIT, ASE, CASTEP, CP2K, CPMD, CRYSTAL09, Elk, EMTO, Exciting, Fleur, FHI-aims, Hutsepot, MOPAC, Quantum Espresso, RSPt, Siesta, SPR-KKR, VASP. Also exports some related formats like .coo, .cfg and .xyz-files. The program has been published...
    Downloads: 10 This Week
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  • 14
    PK2Aux is a library and suite of command-line utilities for using the Microchip PICkit2 programmer device for purposes other than programming (such as the generic pin controls, serial UART, and logic analyzer modes provided by the Windows software).
    Downloads: 0 This Week
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  • 15
    DebUsSy DFA Suite
    A Suite of Programs implementing a fast approach to the Debye Function Analysis (DFA) of powder diffraction data from nanocrystalline and/or non-ordered materials. See J. Appl. Cryst. 2015, 48, 2026-2032
    Downloads: 1 This Week
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  • 16
    YCTget

    YCTget

    Program to fetch datas from YC-7x7 dataloggers from YCT

    We needed a datalogger, we found one. But the supplied VB6 program was very crappy, _really_ unusable, even on old XP machines. So I did mine, able to run under windows and linux. All the fun was to reverse the (binary) RS232 protocol. Our is a YC-727D with 2 thermocouple inputs, but the protocol is the same for 1, 2, 3 or 4 inputs models (YC-717, YC-727, YC-737, YC-747). Bytes orders needs to be checked for 3th and 4nd channels tough.
    Downloads: 0 This Week
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  • 17
    GILIB

    GILIB

    GILIB Large Integer Arithmetic Library

    A large integer arithmetic library written in plain C.
    Downloads: 0 This Week
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  • 18
    An R package for metrology. metRology provides classes and calculation and plotting functions for metrology applications, including measurement uncertainty estimation and (eventually) inter-laboratory metrology comparison studies.
    Downloads: 0 This Week
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  • 19
    The Hspell Project

    The Hspell Project

    A free Hebrew spell-checker and morphological analyzer

    hspell - Hebrew spellchecker
    Downloads: 0 This Week
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  • 20

    octave-intinf

    Infinite-precision integer arithmetic for Octave, written in Octave

    Octave code to perform arbitrary-precision integer arithmetic. It may or may not work in Matlab. The supported operations are: >> s = a = intinf (126) % Creation of intinf-class object from integer or string >> b = intinf ('-792716404922304611755050042308687') >> c = a + b % Addition >> d = a - b % Subtraction >> e = c * d % Multiplication >> f = (e - a^2) / b %...
    Downloads: 0 This Week
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  • 21
    MGF 2 FOR-JSON

    MGF 2 FOR-JSON

    Conversion of MGF files to JSON format

    Want to convert an MGF file to JSON format? This is the app for you, especially if you want to use the JSON file in the FOR-IDENT search program. If you don't know what MGF file, JSON format, FOR-IDENT search program is then this isn't the app for you. Happy conversion!
    Downloads: 0 This Week
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  • 22

    bspipe

    An End-to-End Analysis Pipeline for BS-seq

    BSpipe is a comprehensive pipeline from sequence quality control and mapping to functional analysis of differentially methylated regions: (1) sequencing quality assessment, (2) sequence cleaning, (3) sequence read mapping, (4) methylation quantification, (4) sample comparisons based on methylation profile, (5) identification of DMRs (differentially methylated regions), (6) annotation of DMRs, (7) functional analysis of differentially methylated genes, (8) generation of input files...
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  • 23
    A collection of tools that can be used to generate monitors ("watchdogs") from LTL formulae. This is known from the area of runtime verification. For more information, see the associated project homepage.
    Downloads: 0 This Week
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  • 24
    Convert C++ software programs into synthesisable Verilog using the Clang compiler frontend to parse and SystemC for intermediates.
    Downloads: 0 This Week
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  • 25
    Meraculous-2D

    Meraculous-2D

    Eukaryotic Genome Assembler

    ---------------------------------------- IMPORTANT: Meraculous-2D has been superseded by the HipMer assembler, available here: https://sourceforge.net/projects/hipmer/ ----------------------------------------- Meraculous-2D is a whole genome assembler for NGS reads (Illumina) that is capable of assembling large, diploid genomes with modest computational requirements. Features include: - Efficient k-mer counting and deBruijn graph traversal - Two modes of handling of diploid...
    Downloads: 1 This Week
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