Search Results for "c code" - Page 17
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Showing 934 open source projects for "c code"
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neuranep
Neural Network Engineering Platform
A parallel-programming framework for concurrently running large numbers of small autonomous jobs, or microthreads, across multiple cores in a CPU or CPUs in a cluster. NeuraNEP emulates a distributed processing environment capable of handling millions of microthreads in parallel, for example running neural networks with millions of spiking cells. Microthreads are general processing elements that can also represent non-neural elements, such as cell populations, extracellular space, emulating... -
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MPI/C++ code to generate initial conditions for cosmological simulations using multiscale gaussian random fields, based on Edmund Bertschinger's GRAFIC-2 package. Provides a replacement for both grafic1 and grafic2.
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Unofficial ParaView SDK
Unofficial ParaView Development Installation
The objective of this project is to provide the "ParaView Development Installation" packages that Kitware hasn't released since ParaView 3.8.1: http://www.paraview.org/files/v3.8/ For more details, please visit our wiki: https://sourceforge.net/p/unofficial-paraview-sdk/wiki Note: This project was moved from Google Code, where it was named "unofficial-paraview-dev-install". = License and Legal = This project is not endorsed by Kitware, the makers and owners of... -
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Automatic cell lineage reconstruction
Automatic segmentation and tracking for 3D time-lapse microscopy
From Amat et al., Nature Methods, 2014*: "The comprehensive reconstruction of cell lineages in complex multicellular organisms is a central goal of developmental biology. We present an open-source computational framework for segmentation and tracking of cell nuclei with high accuracy and speed. We demonstrate its (1) generality, by reconstructing cell lineages in four-dimensional, terabyte-sized image data of fruit-fly, zebrafish and mouse embryos, acquired with three different types of... -
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LightCAS
LightCAS is very lightweigth Computer Algebra System
LightCAS is lightweight Computer Algebra System. Its size is less that 50K of compiled code. LightCAS can parse, display, evaluate and simplify mathematical expressions. It can also compute derivatives, find solutions of one or second order expressions, solve systems of equations, compute Taylor series. Its code is intended to be full configurable for most applications. -
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SOAP3-DP
Fast, Accurate and Sensitive GPU-based Short Read Aligner
...SOAP3-dp natively supports BAM file format and provides the same scoring scheme as BWA, which enables it to be integrated into existing analysis pipelines. Citation: Luo R, Wong T, Zhu J, Liu C-M, Zhu X, et al. (2013) SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner. PLoS ONE 8(5): e65632. doi:10.1371/journal.pone.0065632 -
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Face Recognition System
Face Recognition System Matlab source code
Research on automatic face recognition in images has rapidly developed into several inter-related lines, and this research has both lead to and been driven by a disparate and expanding set of commercial applications. The large number of research activities is evident in the growing number of scientific communications published on subjects related to face processing and recognition. Index Terms: face, recognition, eigenfaces, eigenvalues, eigenvectors, Karhunen-Loeve algorithm. -
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The target system of this project is to develop mathematically efficient program code generator from cellml like biological models described by mathematical markup languages.
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MICA-aligner
Next-generation sequencing short reads aligner based on Intel® MIC
Latest Code in GitHub: https://github.com/aquaskyline/MICA-aligner To better utilize MIC-enabled computers for NGS data analysis, we developed a new short-read aligner MICA that is optimized in view of MIC’s limitation and the extra parallelism inside each MIC core. Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp. Furthermore, MICA’s... -
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CPPQUADPACK
C++ port of QUADPACK with general function defination style.
Numerical integration package in C++. A C++ port of QUADPACK with a general function defination style to provide more flexible function parameter defination. Based on crbond C version QUADPACK(http://www.crbond.com/scientific.htm) . You can get the latest code by : git clone git://git.code.sf.net/p/cppquadpack/code cppquadpack-code -
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igafem
Open source 3D Matlab Isogeometric Analysis Code
...The tight coupling of CAD and analysis within IGA requires knowledge from both fields and it is one of the goals of the MIGFEM is to provide a simple-to-understand IGA FEM code. The work is funded under the FP7 Initial Training Network Funding under grant number 289361 'Integrating Numerical Simulation and Geometric Design Technology.' If you use this code or inspired by it please cite the following reference in your work: VP Nguyen, C Anitescu, S Bordas, T Rabczuk. "Isogeometric analysis: an overview and computer implementation aspects". ... -
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fPotencia
Power flow library in C++
...After observing the lack of ready-to-implement libraries for power system analisys, and that the existing ones focus on command line workflow, I decided myself to start a project to fill the gap. Since Power system simulations have started needing to be executed in parallel, the old C-like designs are outdated; modular design is now needed to launch many simulations at the same time based on a base circuit. fPotencia is programmed in C++, but my intention is to bring JAVA, C#, Python and perhaps MATLAB versions of it. All of them in native code and whenever possible with the same modular structure. -
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MetricKnn
Fast Similarity Search using the Metric Space Approach
MetricKnn is an open source library to address the problem of similarity search, i.e., to efficiently locate objects that are close to each other according to some distance function. MetricKnn is comprised of: * Command Line, which is able to perform similarity searches through console commands. Available for Windows and Linux. * C API, which provides the implementation of different indexes, distances and search methods. * C++ API, which is a thin C++ wrapper of the C API. The intended users are software developers, academics, students and data scientist who need to efficiently compare objects according to some criteria. MetricKnn is an open source project released under the BSD 2-Clause License. ... -
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Advanced Normalization Tools ( ANTs )
Multidimensional image registration, segmentation and statistics
*** This is an archive only, please see https://github.com/ANTsX for this and other ANTsX tools *** Image registration with variable transformations (elastic, diffeomorphic, diffeomorphisms, unbiased) and similarity metrics (landmarks, cross-correlation, mutual information, etc). Image segmentation with priors & nonparametric, multivariate models. *** Current ANTs code, binaries (Mac, Windows, Linux) and support is hosted at Github *** https://github.com/ANTsX/ANTs Docker... -
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RoboComp is a robotics framework providing a set of open-source, distributed, real-time robotic and artificial vision software components and the necessary tools to create and manage them.
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MSL
http://dx.doi.org/10.1002/jcc.22968
MSL is a C++ library that enables the computational study of macromolecules. The MSL library is not a program (although some applications are distributed) but a tool for scientist to code their own molecular modeling methods. Philosophy The main goal is to create a set of tools that enable the computational study of macromolecules with relative ease at all levels, from simple operations (for example, load a PDB and measure a distance or edit a dihedral) to complex applications (protein modeling or design). ... -
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SL2
SL2 (= SLSL) - A Simple Linear Systems Library
SL2 is a C++ template library for solving systems of linear equations, providing the most common algorithms for dense and sparse systems. It uses OpenMP for parallelization and has no other dependencies. As the name suggests, SL2's implementation is staightforward with a focus on clear concepts, easy usage and understandable code. -
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[OBSOLETE, check Github repository: https://github.com/LBT-CNRS/MDDriver) MDDriver is a library allowing a user to easily couple molecular visualisation tools with simulation code through a network. It allows to carry out interactive molecular dynamics, visualize simulation results and drive a simulation in interactive time.
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The 1-dimensional gas-dynamics code. More information in http://www.openwam.com Modeling is an important technique for the optimization of internal combustion engines (ICE). The use of calculation models together with experimental tests is producing unquestionable successes due to the fact that both techniques complement each other. 1D wave action models simplify the engine by means of ducts, where only one dimension is considered, and volumes where mass accumulation is considered and...
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LWPR
Locally Weighted Projection Regression (LWPR)
Locally Weighted Projection Regression (LWPR) is a fully incremental, online algorithm for non-linear function approximation in high dimensional spaces, capable of handling redundant and irrelevant input dimensions. At its core, it uses locally linear models, spanned by a small number of univariate regressions in selected directions in input space. A locally weighted variant of Partial Least Squares (PLS) is employed for doing the dimensionality reduction. Please cite: [1] Sethu... -
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MFImport
Measurement Flight Import
Based on ATSDB, this application allows reading text-based GPS trails from Measurement Flights, adding of Mode S/A attributes and inserted into the database. -
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potfit
potfit force-matching code
The potfit code uses the force-matching method to generate effective potentials from ab-initio reference data. -
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SAMI
Home Automation System for A Typical Apartment
SAMI is an extensible, voice-controlled home automation system which seamlessly controls all of the pieces of your apartment or house, without installation or monthly fees. For more information about how to use her, see the documentation tab! -
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MXLib is a C++ wrapper around the Intel® Integrated Performance Primitives (IPP) library and NVidia NPP CUDA library. You can use either IPP code (or a subset of functions that do not require IPP) on the CPU side, or use NPP/CUDA on the GPU side, or use both together. The function syntax is similar to that found in MatLab and the library is designed to make it easy to port your code from MatLab to C++.
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IRK! Infrared Remote USB Keyboard
Control your computer with an IR remote
This is an open-hardware Infrared Remote Controlled USB keyboard, without keys, implemented using a PIC micro-controller and MikroC. IRK! enables you to use your LEARNING remote control to control any system that you can plug a USB keyboard into (Windows, Linux, Mac). Great for controlling a home theatre system such as MythTV, XBMC or Media Center. No drivers are required. You can program *any* USB keyboard function (with or without Control, Alt, Shift and GUI modifiers) to a button on...
