Showing 6 open source projects for "raw"

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  • 1
    mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
    Downloads: 0 This Week
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  • 2
    coronavirus

    coronavirus

    The coronavirus dataset

    ...Relevant and updated information about the virus, such as summary of new cases by country and total number of cases by region can be retrieved from this package. The raw data is pulled and arranged by the Johns Hopkins University Center for Systems Science and Engineering, which is gathered from various leading sources including the World Health Organization, China CDC, US CDC, European Centre for Disease Prevention and Control, and Australia Government Department of Health.
    Downloads: 0 This Week
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  • 3
    dataMAPPs

    dataMAPPs

    R based pipeline for MHC-associated peptide proteomics (MAPPs) data

    dataMAPPs allows routine and efficient processing of data from immunogenicity studies applying the MAPPs peptidomics technology to detect potential MHCI- or MHC-II epitopes as presented by dendritic cells (DC). It features quality control of the raw data, across-sample/across-donor normalization and visualization of results in a heatmap style (heatMAPPs). dataMAPPs' core is a generic R library that can be tailored to specific projects via dedicated control scripts which also allow reproducible recalculation of results. Consult README file for installation and usage instructions. ...
    Downloads: 1 This Week
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  • 4

    Mobile Tracking Processor

    An easy way to remove noise from mobile telemetry data

    This program takes a .txt input file containing the raw output from a Lotek SRX800 receiver and removes false detections based on a user-provided .csv of tagging data.
    Downloads: 0 This Week
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  • 5
    ncPRO-seq

    ncPRO-seq

    Non-Coding RNA PROfiling from sRNA-seq

    ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in...
    Downloads: 0 This Week
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  • 6
    BigBang/Horizon is a proteomics data analysis pipeline with focus on the shotgun LC/MSMS workflow.
    Downloads: 0 This Week
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