Open Source Research Software - Page 8

Horos™ is a free, open source medical image viewer. The goal of the Horos Project is to develop a fully functional, 64-bit medical image viewer for OS X. Horos is based upon OsiriX and other open source medical imaging libraries. Horos is made available under the GNU General Public License, Version 3 (GPL-3.0).

Este projeto visa criar um sistema para gerenciamento de grupos de pesquisa para a disciplina IN980-Topicos Avancados em Eng. de Software (Reuso Estrategico em Linhas de Produtos de Software). Disciplina ofertada em 2010.01 no Cin-UFPE.

Create phyiscal simulations easily through IPSA which combines the OpenInventor 3D API with the Open Dynamics Engine (ODE). Scenes are read from .iv files and simulated in the supplied viewer applications. Find it at: http://ipsa.sourceforge.net

The Image Markup Tool will be an editing environment for creating TEI P5 XML files in which zones defined on images are linked to XML elements containing transcription and annotation data.

Java generic API for search algorithms on graphs implicitly given by tree node expansion operator

We compared the performance of four publicly available in silico fragmentation tools that help in structure elucidation of metabolites (MetFrag, CFM-ID, MAGMa+ and MS-FINDER). Using the output of these tools we developed a voting/consensus model which is combining, re-ordering and re-ranking the candidates file and increases the correct hit percentage. We used 520 compounds from the 2016 CASMI challenge with 312 compounds for training and 208 compounds for validation purposes.

A C++ library of operations on polyhedra and hyperplane arrangements. See Theoretical and Computational Methods of Lattice Point Enumeration in Inside-out Polytopes, http://math.sfsu.edu/beck/teach/masters/andrewv.pdf.

Aim is to extract the information from the cadastral maps which is stored as scanned images. The extracted information is stored using graph representation. Then we convert these infomation in to CityGML format to visualize and communicate.

This is a MATLAB implementation of inverse compositional Active Appearance Models (AAMs), as described in the "Active Appearance Models Revisited" paper by Iain Matthews and Simon Baker.

Java-based Image Server engine to organise high resolution images. The intermediate images will be generated transparently and available through defined URLs. The aim is to extended to Digital Asset Management Server

JSONLab is a free and open-source JSON/UBJSON/MessagePack encoder and decoder written in the native MATLAB language. It can be used to convert a MATLAB data structure (array, struct, cell, struct array, cell array, and objects) into JSON/UBJSON/MessagePack formatted strings and files, or to parse a JSON/UBJSON/MessagePack file into MATLAB data structure. JSONLab supports nearly all versions of MATLAB and GNU Octave (a free MATLAB clone). The development of JSONLab is currently funded by the US National Institute of Health (NIH) as part of the NeuroJSON project (data portal https://neurojson.io) under grant U24-NS124027. The goal of the NeuroJSON project is to develop scalable, searchable, and reusable neuroimaging data formats and data-sharing platforms. All data produced from the NeuroJSON project will be using JSON/Binary JData formats as the underlying serialization standards and the lightweight JData specification as a language-independent data annotation standard.

This is a project which contains solutions for most important problems in Java development and it can be used by everybody.

This project presents a statistical model of a jointly optimized beamformer-assisted acoustic echo canceler (AEC). The constrained joint optimization problem can be formulated so that it becomes equivalent to the linearly-constrained minimum variance problem. The new formulation leads to analytical models that can be used to predict the transient performance of adaptive wideband beamformers. A stochastic model is derived for the transient and steady-state behaviors of the residual echo power. The convergence analysis provides a stability bound for the adaptation step-size. Monte Carlo simulations can be performed to illustrate the accuracy of the model, which can then used to provide design guidelines. Application of the new model confirms previous experimental findings that the same cancellation performance of a single-microphone AEC can be achieved with a shorter AEC when the possibility of spatial filtering is available.

Fiducial markers such as QR codes, ArUco, and AprilTag have become very popular tools for labeling and camera positioning. They are robust and easy to detect, even in devices with low computing power. However, their industrial appearance deters their use in scenarios where an attractive and visually appealing look is required. In these cases, it would be preferable to use customized markers showing, for instance, a company logo. This work proposes a novel method to design, detect, and track customizable fiducial markers. Our work allows creating markers templates imposing few restrictions on its design, e.g., a company logo or a picture can be used. The designer must indicate positions into the template where bits will encode a unique identifier for each marker. Then, our method will automatically create a dictionary of markers, all following the same design, but each with a unique identifier.

This is an application of leveling network adjustment based on Matlab. The method used in this application is least square adjustment. User can enter the leveling data directly or by reading a text file.

Kinred is an open source hardware and software integrator, created by professionals for professional students.

Kemet API is a Java library which introduces the transcription and transliteration of egyptian hieroglyphs based on the list of Gardiner's signs (middle egyptian). Kemet API is a part of Kemet project - Art and Culture - Archeology - Egypt

KemetLF is a Java/Swing library + DEMO which defines the Look and Feel of kemet project. This library which introduces the transcription and transliteration of egyptian hieroglyphs based on the list of Gardiner's signs (middle egyptian) - Art and Cu

The project contains algorithms for locating the most central groups in complex networks. In particular implementations of various centrality measures and heuristic search algorithms. All functionality is exposed via XML-RPC for easier exploitation.

The Key Store is a directory where users can find the symbolic meaning to a word as defined in Holy Scripture. These are often referred to as the keys of the Kingdom of Heaven. Much like a secret code, the directory exposes a universal dialect, all but nearly lost throughout the Dark Ages of time. Yet, fragments of this language remained until today such as, Father = Time and Mother = Nature. The database is expandable to grow as more entries and the sources are uncovered.

This is an open source institutional repository to manage research publications from conception stage to publication stage. It is designed for storing open access publications and all their corresponding metadata. The software manages peer-reviewed journal publications, confrence abstracts and posters, thesis and dissertations and other academic and research outputs.

L2MI - Little Modem Multiple Interface is a project that provide a firmware and hardware description of an educational Modem with multiple interfaces.

This application will allow users of libraries of academic institutions to manage their items.

LaTeX2MathML is a PHP5 class that converts LaTeX math formulas to Presentation MathML. Current versions are still in development !

This software is a Perl Catalyst based electronic lab notebook (ELN) aiming for small biologic laboratories, that have no funding to invest into a closed source ELN.