Search Results for "user"
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Showing 25 open source projects for "user"
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TinyTeX
Cross-platform, portable, and easy-to-maintain LaTeX distribution
...TinyTeX, is a custom LaTeX distribution based on TeX Live that is small in size but still functions well in most cases. Even if you run into the problem of missing LaTeX packages, it should be super clear to you what you need to do. In fact, if you are an R Markdown user, there is nothing you need to do, because missing packages will just be installed automatically. You may not even know the existence of LaTeX at all since it should rarely bother you. Currently, TinyTeX works best for R users. Other users can use it, too—it is just that missing LaTeX packages won’t be automatically installed, and you need to install them manually. ... -
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future
R package: future: Unified Parallel and Distributed Processing in R
...It handles automatic exporting of needed global variables/functions, managing of packages, RNG, etc. Automatic detection and export of global objects and functions needed by future expressions, so the user doesn’t need to manage that manually. Ability to control how futures are resolved. -
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GDINA Package for Cognitively Diagnostic
Package for Cognitively Diagnostic Analyses
Estimating G-DINA model and a variety of widely-used models subsumed by the G-DINA model, including the DINA model, DINO model, additive-CDM (A-CDM), linear logistic model (LLM), reduced reparametrized unified model (RRUM), multiple-strategy DINA model for dichotomous responses. Estimating models within the G-DINA model framework using user-specified design matrix and link functions. Estimating Bugs-DINA, DINO and G-DINA models for dichotomous responses. Estimating sequential G-DINA model for ordinal and nominal responses. Estimating the generalized multiple-strategy cognitive diagnosis models (experimental). Estimating the diagnostic tree model (experimental). Estimating multiple-choice models. ... -
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brms
brms R package for Bayesian generalized multivariate models using Stan
brms is an R package by Paul Bürkner which provides a high-level interface for fitting Bayesian multilevel (i.e. mixed effects) models, generalized linear / non-linear / multivariate models using Stan as the backend. It allows R users to specify complex Bayesian models using formula syntax similar to lme4 but with far more flexibility (distributions, link functions, hierarchical structure, nonlinear terms, etc.). It supports model diagnostics, posterior predictive checking, model comparison,... -
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on... -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
7
QBPWCF
PHP library for not only web-based application in Fedora Linux
此專案的目的是要建立簡單、易用、參數說明完整且富有調整性的PHP元件庫，讓PHP程式設計開發者可以輕鬆地建立高度客製化的應用。 套用當代的術語而言，就是要作為LOW CODE平台的函式庫。 -
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MHNs Data Science Examples
Collection of data science examples.
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Glycometrics
Algorithms for glycaemic variability
Glycometrics is a collection of algorithms that provide metrics for glycaemic variability. Its application is mainly in theoretical endocrinology and diabetes research. -
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No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
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11
MetEx
MetEx is a computational tool for metabolite targered extraction and a
...To date, however, there is a scarcity of efficient, systematic, and easy-to-handle tools that are tailored for metabolomics and exposome community. So we developed a user-friendly and powerful software/webserver, MetEx, to both enable implementation of classical peak detection-based annotation and a new annotation method based on targeted extraction algorithms. The new annotation method based on targeted extraction algorithms can annotate more than 2 times metabolites than classical peak detection-based annotation method because it reduces the loss of metabolite signal in the data preprocessing process. -
12
AI-Agent-Host
The AI Agent Host is a module-based development environment.
The AI Agent Host integrates several advanced technologies and offers a unique combination of features for the development of language model-driven applications. The AI Agent Host is a module-based environment designed to facilitate rapid experimentation and testing. It includes a docker-compose configuration with QuestDB, Grafana, Code-Server and Nginx. The AI Agent Host provides a seamless interface for managing and querying data, visualizing results, and coding in real-time. The AI... -
13
methylr
a single shiny solution from sequencer data to pathway analysis
Here we introduce methylR, a complete pipeline for the analysis of both 450K and EPIC Illumina arrays which not only offers data visualization and normalization but also provide additional features such as the annotation of the genomic features resulting from the analysis, pairwise comparisons of DMCs with different graphical representation plus functional and pathway enrichment as downstream analysis, all packed in a minimal, elegant and intuitive graphical user interface which brings the analysis of array DNA methylation data. -
14
hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS -
15
Scripting Language Bindings
A port of WFOPT to the several scripting languages
This project contains bindings for various scripting languages to the Wheefun Options Parsing Library. It is meant to provide parity with the C implementation so .NET languages can take advantage of WFOPT. For more information, please see the main page. -
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generativeart
Create Generative Art with R
generativeart is an R package for creating algorithmic art by computing the positions of many thousands of points according to user-defined mathematical formulas with randomized parameters. Each render uses a seed to introduce controlled randomness, so every image is unique while remaining reproducible when the same seed and formula are reused. The package logs the seed, formula, and file name to a CSV, which makes it easy to catalog outputs, re-generate favorites, and track experiments. ... -
17
Covidex
Ultra fast and accurate subtyping tool of viral genomes.
Viral subtypes or clades represent clusters among isolates from the global population of a defined species. Subtypification is relevant for studies on virus epidemiology, evolution and pathogenesis. In this sense, Covidex was developed as an open source alignment-free machine learning subtyping tool. It is a shiny app that allows fast and accurate classification of viral genomes in pre-defined clusters. If more than 1000 sequences are loaded the tool will run in multithread mode. Capable of... -
18
stat-cookbook
The probability and statistics cookbook
A compact “Probability and Statistics Cookbook” offering concise mathematical recipes for key statistical concepts—expectation, variance, distributions and inequalities—packaged as LaTeX and R-based executable documents. -
19
QuantifyPoly(A)
Quantification of poly(A) sites from 3' end sequencing data
QuantifyPoly(A) - a tool for quantification of poly(A) sites from 3' end sequencing data. [1] QuantifyPoly(A) user manual Please visit the Wiki page of this website. [2] QuantifyPoly(A) Q&A For Q&A, please visit the Blog page of this website. [3] QuantifyPoly(A) bug report You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website. -
20
yabasta
Yet Another BAsic Scraper and Text Analysis
YA BASTA! is a Python/R application for Lyrics Web Scraper and Text Analysis. Web scraping is developed in Python, text analysis in R as Python subprocesses. YA BASTA! is only tested on windows OS. To run YA BASTA! just type on window command prompt: python.exe yabasta.py -
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swirl
Learn R, in R
swirl is an R package that allows interactive, in-R learning of statistics, data science, R programming etc. The idea is that you load swirl in R, and it presents you with lessons (within R’s console or RStudio) that ask you to type commands, check results, and progress through tutorial material—without leaving the R environment. It is used for teaching R, especially for beginners, as well as for self-paced learning of packages, data manipulation, visualization, etc. Lessons and content are... -
22
Investing
Investing Returns on the Market as a Whole
This repository, owned by the user zonination (Zoni Nation), presents a data visualization and analysis project on long-term returns from broad stock market indexes, especially the S&P 500. The author gathers historical price data (adjusted for inflation and dividends) and computes growth trajectories under a “buy and hold” strategy over decades. The key insight illustrated is that over sufficiently long holding periods (e.g. 40 years), the stock market stabilizes and nearly always yields positive returns, even accounting for extreme market crashes and recessions. ... -
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Mastering Shiny
Mastering Shiny: a book
Mastering Shiny is a book (and its accompanying source repository) by Hadley Wickham that teaches people how to build interactive web applications using Shiny in R. It starts from basics (your first app, UI components, reactivity) and progresses to more advanced topics (dynamic UIs, modules, testing, security, performance). It is intended to help data scientists, analysts, or R users who may not have deep experience in web technologies become expert Shiny developers. The source code is open,... -
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RStan
RStan, the R interface to Stan
RStan is the R interface to Stan, a C++ library for statistical modeling and high-performance statistical computation. It lets users specify models in the Stan modeling language (for Bayesian inference), compile them, and perform inference from R. Key inference approaches include full Bayesian inference via Hamiltonian Monte Carlo (specifically the No-U-Turn Sampler, NUTS), approximate Bayesian inference via variational methods, and optimization (penalized likelihood). RStan integrates with... -
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brics
www.youtube.com/@Akhona_Kama
BRICS COIN is a decentralized cryptocurrency project designed to empower users in the BRICS nations (Brazil, Russia, India, China, and South Africa) by providing a secure, efficient, and accessible means of digital value transfer and financial inclusion. Built on the Ethereum blockchain as an ERC20 token, BRICS COIN aims to facilitate cross-border transactions, enhance economic collaboration, and foster innovation within the BRICS countries. Key Features Token Functionality: ERC20...
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