Showing 6 open source projects for "command line tools"

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  • 1
    QBPWCF

    QBPWCF

    PHP library for not only web-based application in Fedora Linux

    此專案的目的是要建立簡單、易用、參數說明完整且富有調整性的PHP元件庫,讓PHP程式設計開發者可以輕鬆地建立高度客製化的應用。 套用當代的術語而言,就是要作為LOW CODE平台的函式庫。
    Downloads: 0 This Week
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  • 2
    Amplicon_Sequencing_Worfklow

    Amplicon_Sequencing_Worfklow

    Analyzing amplicon data from sequences to stats

    ...I created this workflow to create a consistent set of methods for analyzing amplicon sequence data, from when you first receive the sequence data to statistical analyses & data visualization. All you need is to have the latest version of R installed, some experience with the command line & shell, and enough memory to run all of the programs. There are also instructions provided in case you are running these analyses via a computing cluster/Slurm workload manager. You can choose to go through the workflow using either an Rmd script, an html file, or a PDF, or via the homepage link provided. If you have questions or concerns, please don't hesitate to reach out. ...
    Downloads: 0 This Week
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  • 3

    Scripting Language Bindings

    A port of WFOPT to the several scripting languages

    This project contains bindings for various scripting languages to the Wheefun Options Parsing Library. It is meant to provide parity with the C implementation so .NET languages can take advantage of WFOPT. For more information, please see the main page.
    Downloads: 0 This Week
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  • 4

    miRPV

    miRPV: An automated pipeline for miRNA Prediction and Validation in si

    miRPV is an Automated tool that allows users to predict and validate microRNA from genome/gene sequence. System Requirement CPU: AMD64 (64bit) Memory: 2Gb RAM Storage: 5Gb Ubuntu 18.04
    Downloads: 0 This Week
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  • 5
    MitoSAlt

    MitoSAlt

    Identification of mitochondrial structural alterations

    MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided.
    Downloads: 8 This Week
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  • 6
    bookdownplus

    bookdownplus

    Use R package bookdown for writing varied types of books and documents

    ...It is a collection of multiple templates on the basis of LaTeX, which is tailored so that I can work happily under the umbrella of bookdown. bookdownplus helps you write academic journal articles, guitar books, chemical equations, mails, calendars, and diaries. bookdown features the collaboration of many fantastic tools. However, an R beginner might be confused or depressed in struggling in the flood of LaTeX, YAML, Markdown, Pandoc, etc. It would be a pity if users stopped their steps at the door and gave up the courage to enter the wonderful world of bookdown. bookdownplus is the easiest shortcut to the world of bookdown. With just one single command users can get a demo book (or multiple demo books) in .pdf or .doc, or even more formats. bookdownplus extends the features of bookdown, and simplifies the procedure.
    Downloads: 0 This Week
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