Showing 48 open source projects for "using"

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    Atera all-in-one platform IT management software with AI agents

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    Vibes don’t ship, Retool does

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  • 1
    ...The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g. unlike Petri nets) to process queries in groups, which is important for the study of the efficiency of using such methods as volumetric calendar planning and AI methods in process activities, since the operating time of these methods depends on the number of parameters and changes nonlinearly; - the study of multiprocess systems; - the results were obtained, that allow you to find efficient topologies of structural-functional models.
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  • 2
    httr

    httr

    httr: a friendly http package for R

    httr is superseded: only changes necessary to keep it on CRAN will be made. We recommend using httr2 instead. The aim of httr is to provide a wrapper for the curl package, customized to the demands of modern web APIs. Functions for the most important http verbs: GET(), HEAD(), PATCH(), PUT(), DELETE() and POST(). Automatic connection sharing across requests to the same website (by default, curl handles are managed automatically), cookies are maintained across requests, and an up-to-date root-level SSL certificate store is used. ...
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  • 3
    Amplicon_Sequencing_Worfklow

    Amplicon_Sequencing_Worfklow

    Analyzing amplicon data from sequences to stats

    ...There are also instructions provided in case you are running these analyses via a computing cluster/Slurm workload manager. You can choose to go through the workflow using either an Rmd script, an html file, or a PDF, or via the homepage link provided. If you have questions or concerns, please don't hesitate to reach out. Thanks!
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  • 4
    R Packages (r-pkgs)

    R Packages (r-pkgs)

    Building R packages

    rpkgs (in GitHub via hadley/r-pkgs) is the source (text + examples) for the book R Packages by Hadley Wickham and Jenny Bryan. The book teaches how to develop, document, test, and share R packages: the practices, tools, infrastructure, workflows, and best practices around package development in R. The repository contains the code, text, site content for building the book, examples, exercises, etc. It is not a software library to be loaded in R (except perhaps the examples), but a...
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  • 5
    activAnalyzer
    activAnalyzer is a Shiny app that has been developed to analyze daily physical behavior data recorded at the hip in adults using an ActiGraph accelerometer (.agd file from a GT3X, GT3X+, wGT3X+ or wGT3X-BT device). Once analysis is completed, the app allows exporting results to .csv files and generating a report of the measurement (in either an .html format or a .pdf format). All the configured inputs relevant for interpreting the results are recorded in the report.
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  • 6
    hui

    hui

    hewies user interface - 3D scientific visualisation tool

    ...The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS
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  • 7
    OmicSelector

    OmicSelector

    Feature selection and deep learning modeling for omic biomarker study

    ...It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant diagnostic potential (based on the results of miRNA-seq, for validation in qPCR experiments).
    Downloads: 0 This Week
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  • 8
    geocompr

    geocompr

    Geocomputation with R: an open source book

    This repository hosts the source for Geocomputation with R, an open-source book covering spatial data analysis, visualization, and modeling using R. It teaches how to work with vector and raster data, coordinate systems, mapping, and geocomputation techniques using packages like sf, terra, tmap, and more. Actively maintained and updated for real-world geospatial workflows.
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  • 9
    osm4scala

    osm4scala

    Reading OpenStreetMap Pbf files.

    Scala and polyglot Spark library (Scala, PySpark, SparkSQL, ... ) focused on reading OpenStreetMap Pbf files.
    Downloads: 0 This Week
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  • Desktop and Mobile Device Management Software Icon
    Desktop and Mobile Device Management Software

    It's a modern take on desktop management that can be scaled as per organizational needs.

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  • 10
    Statistical Rethinking 2022

    Statistical Rethinking 2022

    Statistical Rethinking course winter 2022

    This repository hosts the 2022 version of the Statistical Rethinking course. It contains course materials such as R scripts, notebooks, and worked examples aligned with McElreath’s textbook. The code emphasizes Bayesian data analysis using R, the rethinking package, and Stan models. It includes lecture code files, example datasets, and structured exercises that parallel the topics covered in the lectures (probability, regression, model comparison, Bayesian updating). The repo functions as a direct hands-on reference for students following the 2022 recorded lecture series. ...
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  • 11
    rethinking

    rethinking

    Statistical Rethinking course and book package

    This R package accompanies Richard McElreath’s Statistical Rethinking (2nd edition), offering utilities to fit and compare Bayesian models using both MAP estimation (quap) and Hamiltonian Monte Carlo via RStan (ulam). It supports specifying models via explicit distributional assumptions, providing flexibility for advanced statistical workflows.
    Downloads: 2 This Week
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  • 12
    R4DS (R for Data Science)

    R4DS (R for Data Science)

    R for data science: a book

    “R for Data Science” (r4ds) is the source material (book + examples) by Hadley Wickham et al., intended to teach data science using R and the tidyverse. It covers the workflow from importing data, tidying, transforming, visualizing, modelling, communicating results, and programming in R. The repository contains the source files (Quarto / RMarkdown), example datasets, visualizations, exercises, and all content needed to build the book. Includes many example datasets, diagrams, code samples, and “hands-on” exercises. ...
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  • 13
    posterdown

    posterdown

    Use RMarkdown to generate PDF Conference Posters via HTML

    ...The rest of this example poster will show how you can insert typical conference poster features into your own document. Posterdown was created as a proof-of-concept (to myself) that it is possible to make a beautiful poster using open-source reproducible code.
    Downloads: 1 This Week
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  • 14
    GDINA Package for Cognitively Diagnostic

    GDINA Package for Cognitively Diagnostic

    Package for Cognitively Diagnostic Analyses

    Estimating G-DINA model and a variety of widely-used models subsumed by the G-DINA model, including the DINA model, DINO model, additive-CDM (A-CDM), linear logistic model (LLM), reduced reparametrized unified model (RRUM), multiple-strategy DINA model for dichotomous responses. Estimating models within the G-DINA model framework using user-specified design matrix and link functions. Estimating Bugs-DINA, DINO and G-DINA models for dichotomous responses. Estimating sequential G-DINA model for ordinal and nominal responses. Estimating the generalized multiple-strategy cognitive diagnosis models (experimental). Estimating the diagnostic tree model (experimental). ...
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  • 15
    Open Intro Statistics

    Open Intro Statistics

    An open-source textbook written at the college level

    OpenIntro Statistics is a dynamic take on the traditional curriculum, being successfully used at Community Colleges to the Ivy League. Each chapter's content is in one of the eight chapter folders that start with "ch_". Within each folder, there is a "figures" folder and a "TeX" folder. The TeX folder contains the text files that are used to typeset the chapters in the textbook. In many cases, R code is supplied with figures to regenerate the figure. It will often be necessary to install the...
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  • 16
    adv-r

    adv-r

    Advanced R: a book

    Source repository for Advanced R, the authoritative guide by Hadley Wickham, built with bookdown (R Markdown) and designed to deepen R users’ understanding of language internals, functional programming, object systems, and metaprogramming.
    Downloads: 1 This Week
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  • 17
    DataScienceR

    DataScienceR

    a curated list of R tutorials for Data Science, NLP

    The DataScienceR repository is a curated collection of tutorials, sample code, and project templates for learning data science using the R programming language. It includes an assortment of exercises, sample datasets, and instructional code that cover the core steps of a data science project: data ingestion, cleaning, exploratory analysis, modeling, evaluation, and visualization. Many of the modules demonstrate best practices in R, such as using the tidyverse, R Markdown, modular scripting, and reproducible workflows. ...
    Downloads: 0 This Week
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  • 18
    RNAseq Tutorial

    RNAseq Tutorial

    Informatics for RNA-seq: A web resource for analysis on the cloud

    ...The version in that repo is deprecated, but still maintains content for those wishing to follow the original published workflow. Includes instruction on cloud computing basics and using cloud environments for large data processing.
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  • 19
    Mastering Shiny

    Mastering Shiny

    Mastering Shiny: a book

    Mastering Shiny is a book (and its accompanying source repository) by Hadley Wickham that teaches people how to build interactive web applications using Shiny in R. It starts from basics (your first app, UI components, reactivity) and progresses to more advanced topics (dynamic UIs, modules, testing, security, performance). It is intended to help data scientists, analysts, or R users who may not have deep experience in web technologies become expert Shiny developers. The source code is open, and the book is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.
    Downloads: 5 This Week
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  • 20
    RStan

    RStan

    RStan, the R interface to Stan

    RStan is the R interface to Stan, a C++ library for statistical modeling and high-performance statistical computation. It lets users specify models in the Stan modeling language (for Bayesian inference), compile them, and perform inference from R. Key inference approaches include full Bayesian inference via Hamiltonian Monte Carlo (specifically the No-U-Turn Sampler, NUTS), approximate Bayesian inference via variational methods, and optimization (penalized likelihood). RStan integrates with...
    Downloads: 0 This Week
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  • 21
    circlize

    circlize

    Circular visualization in R

    circlize is an R package for creating circular visualizations (plots laid out in circular coordinate systems) in a very flexible way. It implements many types of plots using circular layouts: chord diagrams, circular heatmaps, arcs/links between sectors, genomic data visualization, etc. It provides low-level drawing functions as well as high-level functions to build complex visualizations. It’s often used in genomics, network analysis, or other fields where relationships among categories or entities can be nicely displayed in a circular fashion. ...
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  • 22
    ProgrammingAssignment2

    ProgrammingAssignment2

    Repository for Programming Assignment 2 for R Programming on Coursera

    ...You then implement analogous logic for matrices via two functions, one to construct the cache-aware object and another to compute or retrieve the cached inverse. The instructions emphasize using solve for inversion and assuming that the supplied matrix is always invertible. The repository outlines the workflow for forking, editing the provided R stub, committing your solution, and submitting your repository URL as the final deliverable.
    Downloads: 3 This Week
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  • 23
    ExData Plotting1

    ExData Plotting1

    Plotting Assignment 1 for Exploratory Data Analysis

    This repository explores household energy usage over time using the “Individual household electric power consumption” dataset from the UC Irvine Machine Learning Repository. The dataset covers nearly four years of minute-level measurements, including power consumption, voltage, current intensity, and detailed sub-metering values for different household areas. For analysis, focus is placed on a two-day period in February 2007, highlighting short-term consumption trends.
    Downloads: 4 This Week
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