Search Results for "pnpm-linux" - Page 2
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Showing 138 open source projects for "pnpm-linux"
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brms
brms R package for Bayesian generalized multivariate models using Stan
brms is an R package by Paul Bürkner which provides a high-level interface for fitting Bayesian multilevel (i.e. mixed effects) models, generalized linear / non-linear / multivariate models using Stan as the backend. It allows R users to specify complex Bayesian models using formula syntax similar to lme4 but with far more flexibility (distributions, link functions, hierarchical structure, nonlinear terms, etc.). It supports model diagnostics, posterior predictive checking, model comparison,... -
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on... -
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Paper2GUI
Convert AI papers to GUI
...It already supports 40+ AI models, covering AI painting, speech synthesis, video frame complementing, video super-resolution, object detection, and image stylization. , OCR recognition and other fields. Support Windows, Mac, Linux systems. Paper2GUI: 一款面向普通人的 AI 桌面 APP 工具箱，免安装即开即用，已支持 40+AI 模型，内容涵盖 AI 绘画、语音合成、视频补帧、视频超分、目标检测、图片风格化、OCR 识别等领域。支持 Windows、Mac、Linux 系统。 -
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vitae
R Markdown Résumés and CVs
vitae is an R package that streamlines resume and CV creation via R Markdown. It includes a collection of LaTeX and HTML templates along with helper functions to dynamically populate content from data sources such as ORCID or spreadsheets. -
Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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ggraph
Grammar of Graph Graphics
ggraph adapts the Grammar of Graphics from ggplot2 for network and graph visualizations. It integrates with tidygraph/igraph data structures, providing a wide range of geoms, layouts (e.g. hive plots, circle packing), and layering methods tailored to hierarchical or relational data. -
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tidyr
Tidy Messy Data
tidyr is a core tidyverse package designed to help reshape and clean messy datasets into tidy data—i.e., data frames where each variable is a column, each observation is a row, and each value is a cell. -
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magrittr
Improve the readability of R code with the pipe
magrittr introduces the pipe operator (%>%) and related functional utilities into R. It underlies the powerful piped syntax widely adopted in tidyverse workflows by enabling left-hand argument passing and providing helpers like compound assignment pipes and exposition pipes. -
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ggpubr
'ggplot2' Based Publication Ready Plots
ggpubr is an R package that provides easy-to-use wrapper functions around ggplot2 to create publication-ready visualizations with minimal code. It streamlines plot creation for researchers and analysts, allowing features such as statistical annotation, theme customization, and plot arrangement with fewer lines of code. -
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purrr
A functional programming toolkit for R
purrr enhances R’s functional programming capabilities by providing a consistent set of tools for working with lists and vectors, enabling safer and more expressive iteration compared to base R’s loop functions. -
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janitor
Simple tools for data cleaning in R
janitor provides simple, convenient tools for data cleaning, formatting, and exploration in R. It is especially useful for cleaning messy data frames, removing duplicates, formatting column names, and producing frequency tables in a tidy workflow. -
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Readr
Read flat files (csv, tsv, fwf) into R
readr is an R package that provides a fast and friendly way to read rectangular data, such as CSV and TSV files. Part of the Tidyverse, it simplifies data import and parsing tasks in R. -
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easystats
The R easystats-project
easystats is a meta‑package that installs and unifies a suite of R packages for post‑processing statistical models. It delivers a consistent API to assess model performance, effect sizes, parameters, and to generate reports and visualizations, all with minimal dependencies and maximum clarity. -
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devtools
Tools to make an R developer's life easier
devtools is an R package designed to simplify R package development by providing functions for creating, building, testing, and installing packages from various sources (e.g., CRAN, GitHub). It integrates with usethis, roxygen2, testthat, and simplifies workflows for developers and contributors to the R ecosystem. -
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Seurat
R toolkit for single cell genomics
Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies. -
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dplyr
dplyr: A grammar of data manipulation
dplyr is an R package that provides a consistent and intuitive grammar for data manipulation, enabling users to filter, arrange, summarize, and transform data efficiently. Part of the tidyverse ecosystem, dplyr simplifies complex data operations through a clear and readable syntax, whether working with data frames, tibbles, or databases. It is widely used in data science and statistical analysis workflows. -
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workflowr
Organize your project into a research website
workflowr is an R package that helps researchers organize, version, and share their data science projects in a reproducible and transparent manner. It combines R Markdown, Git, and a structured file system to create a research website that tracks analysis, results, and code changes over time. It’s ideal for academic and collaborative research workflows. -
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ggforce
Accelerating ggplot2
ggforce is an extension package for ggplot2 that introduces specialized statistical transforms, geoms, and layout utilities to enhance and complement the built-in ggplot2 offerings. It enables more advanced visualization techniques such as faceting enhancements, hulls, annotation marks, and novel layouts for network data and marked regions. -
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performance
Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)
performance is part of the easystats ecosystem and offers model quality assessment tools for R. It computes metrics like R², RMSE, ICC, and conducts diagnostics such as overdispersion, zero‑inflation, convergence, and singularity checks, complementing model workflows with comprehensive evaluation. -
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blogdown
Create Blogs and Websites with R Markdown
blogdown is an R package that enables the creation and maintenance of static websites and blogs using R Markdown and Hugo (or other static-site generators). Developed by Yihui Xie and team, it provides functions to initialize sites, write posts, manage themes, and deploy with minimal fuss. It seamlessly blends R code chunks and web content, ideal for data storytellers and technical bloggers. -
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Shiny
Build interactive web apps directly from R with Shiny framework
Shiny is an R package from RStudio that enables users to build interactive web applications using R without requiring knowledge of JavaScript, HTML, or CSS. It allows statisticians and data scientists to turn their analyses into fully functional web dashboards with reactive elements, data inputs, visualizations, and controls, making data communication more effective and dynamic. -
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FriendsDon'tLetFriends
Friends don't let friends make certain types of data visualization
Friends don't let friends make certain types of data visualization - What are they and why are they bad. -
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ggstatsplot
Enhancing {ggplot2} plots with statistical analysis
{ggstatsplot} is an extension of {ggplot2} package for creating graphics with details from statistical tests included in the information-rich plots themselves. In a typical exploratory data analysis workflow, data visualization and statistical modeling are two different phases: visualization informs modeling, and modeling in its turn can suggest a different visualization method, and so on and so forth. Bayesian hypothesis-testing. The central idea of {ggstatsplot} is simple: combine these... -
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reticulate
R Interface to Python
reticulate is an R package from Posit that creates seamless interoperability between R and Python. It lets you call Python modules, classes, and functions from within R, automatically translating between R and Python data structures. Useful for combining Python tooling with R projects, data analysis, and RMarkdown reports. -
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pagedown
Paginate the HTML Output of R Markdown with CSS for Print
Paginate the HTML Output of R Markdown with CSS for Print. You only need a modern web browser (e.g., Google Chrome or Microsoft Edge) to generate PDF. No need to install LaTeX to get beautiful PDFs. This R package stands on the shoulders of two giants to support typesetting with CSS for R Markdown documents: Paged.js and ReLaXed (we only borrowed some CSS from the ReLaXed repo and didn't really use the Node package). -
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rvest
Simple web scraping for R
rvest helps you scrape (or harvest) data from web pages. It is designed to work with magrittr to make it easy to express common web scraping tasks, inspired by libraries like beautiful soup and RoboBrowser. If you’re scraping multiple pages, I highly recommend using rvest in concert with polite. The polite package ensures that you’re respecting the robots.txt and not hammering the site with too many requests.
