Search Results for "clustering algorithm"
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Showing 11 open source projects for "clustering algorithm"
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HDBSCAN
A high performance implementation of HDBSCAN clustering
HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over varying epsilon values and integrates the result to find a clustering that gives the best stability over epsilon. This allows HDBSCAN to find clusters of varying densities (unlike DBSCAN), and be more robust to parameter selection. In practice this means that HDBSCAN returns a good clustering straight away with little or no parameter tuning -- and the primary parameter, minimum cluster size, is intuitive and easy to select. ... -
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sktime
A unified framework for machine learning with time series
...It features dedicated time series algorithms and tools for composite model building such as pipelining, ensembling, tuning, and reduction, empowering users to apply an algorithm designed for one task to another. -
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Homemade Machine Learning
Python examples of popular machine learning algorithms
homemade-machine-learning is a repository by Oleksii Trekhleb containing Python implementations of classic machine-learning algorithms done “from scratch”, meaning you don’t rely heavily on high-level libraries but instead write the logic yourself to deepen understanding. Each algorithm is accompanied by mathematical explanations, visualizations (often via Jupyter notebooks), and interactive demos so you can tweak parameters, data, and observe outcomes in real time. The purpose is pedagogical: you’ll see linear regression, logistic regression, k-means clustering, neural nets, decision trees, etc., built in Python using fundamentals like NumPy and Matplotlib, not hidden behind API calls. ... -
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ML for Beginners
12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all
ML-For-Beginners is a structured, project-driven curriculum that teaches foundational machine learning concepts with approachable math and lots of code. Organized as a multi-week course, it mixes short lectures with labs in notebooks so learners practice regression, classification, clustering, and recommendation techniques on real datasets. Each lesson aims to connect the algorithm to a relatable scenario, reinforcing intuition before diving into parameters, metrics, and trade-offs. The repository includes quizzes, solutions, and instructor materials to make the content usable in classrooms or self-study. It emphasizes ethical considerations and model evaluation—accuracy is not the only metric—so students learn to validate and communicate results responsibly. ... -
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DeepCluster
Deep Clustering for Unsupervised Learning of Visual Features
DeepCluster is a classic self-supervised clustering-based representation learning algorithm that iteratively groups image features and uses the cluster assignments as pseudo-labels to train the network. In each round, features produced by the network are clustered (e.g. k-means), and the cluster IDs become supervision targets in the next epoch, encouraging the model to refine its representation to better separate semantic groups. -
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QSdpR
Viral Quasispecies Reconstruction software based on QSdpR algorithm
This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population. -
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node2vec
Learn continuous vector embeddings for nodes in a graph using biased R
The node2vec project provides an implementation of the node2vec algorithm, a scalable feature learning method for networks. The algorithm is designed to learn continuous vector representations of nodes in a graph by simulating biased random walks and applying skip-gram models from natural language processing. These embeddings capture community structure as well as structural equivalence, enabling machine learning on graphs for tasks such as classification, clustering, and link prediction. ... -
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Unsupervised Random Forest
On-line Unsupervised Random Forest
...It supports on-line prediction of new observations (no need to retrain); and supports datasets that contain both continuous (e.g. CPU load) and categorical (e.g. VM instance type) features. In particular, we use an unsupervised formulation of the Random Forest algorithm to calculate similarities and provide them as input to a clustering algorithm. For the sake of efficiency and meeting the dynamism requirement of autonomic clouds, our methodology consists of two steps: (i) off-line clustering and (ii) on-line prediction. RF+PAM can: Cluster observations (Unsupervised Learning) Calculate the dissimilarity between 2 or more observations (how different two observations are) -
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Stanford Machine Learning Course
machine learning course programming exercise
...It includes implementations of a variety of fundamental algorithms using Python and MATLAB/Octave. The repository covers a broad set of topics such as linear regression, logistic regression, neural networks, clustering, support vector machines, and recommender systems. Each folder corresponds to a specific algorithm or concept, making it easy for learners to navigate and practice. The exercises serve as practical, hands-on reinforcement of theoretical concepts taught in the course. This collection is valuable for students and practitioners who want to strengthen their skills in machine learning through coding exercises. -
Run applications fast and securely in a fully managed environmentRun frontend and backend services, batch jobs, deploy websites and applications, and queue processing workloads without the need to manage infrastructure.
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PocketAnalyzerPCA combines a geometric algorithm for detecting pockets in proteins with Principal Component Analysis and clustering. This enables visualization and analysis of pocket conformational distributions of large sets of protein structures.
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