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PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
Location tracks objects based on SSID strength in 2D environments
This simple algorithm gives an example of location tracking in indoor environment using WiFi signals strengths sent to a local sever machine which then determines the clients location.
Fleuron is a silent flash drive copier. When a flash drive is connected, Fleuron automatically starts copying the data with a Breadth First Search algorithm. In this way, the root directories are copied first and as time passes, deeper directories are copied. Fleuron also randomly stops for random amounts of seconds to allow the drive to be safely removed and to avoid detection. Fleuron can be used for data backup, flash synchronization and undetectable data copying.
Note: Currently Fleuron only works on Linux systems.
...The repository covers a broad set of topics such as linear regression, logistic regression, neural networks, clustering, support vector machines, and recommender systems. Each folder corresponds to a specific algorithm or concept, making it easy for learners to navigate and practice. The exercises serve as practical, hands-on reinforcement of theoretical concepts taught in the course. This collection is valuable for students and practitioners who want to strengthen their skills in machine learning through coding exercises.
...I updated this, with a different hash than original, since I found a potential collision on some blocks, not but specific to that challenge. To further correct this, I modified the padding when it's less than the block size.
I hold no guarantee of the security of this algorithm, USE AT YOUR OWN RISK. I have had no 3rd party analysis done on the algorithm to date, but research is welcome, and a challenge is even provided in CHALLENGE.txt.
sqlamp is an implementation of an efficient algorithm for working with hierarchical data structures — Materialized Path. sqlamp uses (and depends of) SQLAlchemy.
GWCNV is a genome-wide algorithm for detecting CNV associations with diseases. It works directly on a transformation of intensity data. It is powerful and sensitive in detecting small CNV associations, and retains high power for large CNVs.
The RDXplorer is a computational tool for copy number variants (CNV) detection in whole human genome sequence data using read depth (RD) coverage. CNV detection is based on the Event-Wise Testing (EWT) algorithm recently published by our group.
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We here present a novel computer algorithm, called AutoClickChem, capable of performing many click-chemistry reactions in silico. In silico modeling of click-chemistry products may prove useful in rational drug design and drug optimization.
This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials.
If you use this code please cite this paper:
P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia.
http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf
imbatcher is an image batcher and rfl Registax Frame List creator that use an Mean Square Difference algorithm to separate images from the same set automatically .
DSS student toolbox is an interface created over the Direct Sequential Simulation algorithm created by A. Soares, 2001. It allows you to launch this simulation method using simple tools from a GUI.
NOTE: this software development is deprecated. You can perform the same operations in our newest software GEOMS2 (beta release). You can download it here: https://sourceforge.net/projects/geoms2/
Free and easy to implement algorithm that can be used for resource leveling in Gantt projects. Uses resources assignment policies, availibility calendars, tasks\' priorities, dependencies, sizings, complexity due to human communication.
A genetic algorithm in Python for evolving programs that write a given string to an allocated dataspace, using a made-up machine language with only 7 instructions and flow reversal.
This project is a complete cross-platform (Windows, Linux) framework for Evolutionary Computation in pure python. See the project site at http://pyevolve.sourceforge.net or the blog at http://pyevolve.sourceforge.net/wordpress
PocketAnalyzerPCA combines a geometric algorithm for detecting pockets in proteins with Principal Component Analysis and clustering. This enables visualization and analysis of pocket conformational distributions of large sets of protein structures.
This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
Based on the introduction of Genetic Algorithms in the excellent book "Collective Intelligence" I have put together some python classes to extend the original concepts.
Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)