Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
pyFoam is a Python front-end to the OpenFOAM (Open Source CFD Toolbox). It introduces interactivity into OpenFOAM, simplifies connection with third-party functionality and streamlines design of custom user solvers
PyTuneSounds is a application that lets the user tune the volumes of sounds in a variety of ways, e.g. to use these in psychoacoustic experiments. It is possible to correct the spectrum of the sound with respect to equipment-inherent filters.
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ContBeam is a program capable of solving structural configurations of continuous beams on multiple supports. it handles conditions and load combinations provide being output characteristics of the stress and deformation of the structure
ESML is an interchange technology that utilizes external metadata to allow applications to plug and play seamlessly with Earth Science specific datasets in heterogeneous formats.
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DTMF detector library and/or application that reads in the specified audio file and returns/outputs whether DTMF detected and/or list of detected digits. May have GUI and command line interfaces.
BESTGUI is a GUI front-end for BEST written in Python and GTK+. BEST (Basic Envisat SAR Toolbox) is an ESA (European Space Agency) software tool designed to facilitate the use of ESA SAR data.
Metmask has moved to github http://github.com/hredestig/metmask
Metmask is a tool written in python for managing chemical identifiers for metabolomics experiments. It can incorporate identifiers from local textfiles, several online databases, query PubChem and record all found associations in a local sqlite database.
This program minimizes boolean expressions. After combining minterms as far as possible, the program draws a chart of prime implicants which the user can easily read and manipulate to remove any remaining superfluous implicants.
Interface to collect data from a Consort R305 unit via RS-232. It allows to record data from 2 units with a total of 4 channels. The graphical interface displays the value of the channels as graphs and saves them in a CSV file.
An Inkscape extension for editable (digital) timing diagrams in publication quality, based on a very simple state-oriented language for signal description.
A python package to find repetitive format pattern in HTML pages and extract information from them using this pattern. The idea is that in pages that have some kind of a list, there will be a repetitive pattern for the human eye (the page format).
the python sudoku solver was done as a first year engineering project, it is programmed in python and it allows the user to enter in an unsolved sudoku .txt file which it then solves and presents the solved sudoku to the user in a user friendly gui.
Naimath (syn. blessing) is a project to create tools for diagnosis, management of clinical cases in the form of Rule based Medical Expert System integrating Interactive Health education, Semantified EMR, and serve as a learning tool for students. Website seen at www.naimath.com
APLpy (the Astronomical Plotting Library in Python) is a Python module aimed at producing publication-quality plots of astronomical imaging data in FITS format. Visit http://aplpy.sourceforge.net/ for tutorials and documentation.
NOTE: We have moved the project to https://bitbucket.org/makokal/openprm/overview, all the code that is still in sf is not maintained anymore. please use the new code at the location given