Search Results for "b-tree" - Page 5
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Showing 266 open source projects for "b-tree"
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Xmaldi
Viewing collections of MALDI spectra and perform PCA and DFA analyses
Xmaldi is an application for viewing collections of MALDI spectra and perform PCA and DFA analyses on them (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/xmaldi3/code/ci/default/tree/README.md -
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JSONVisor
Visor for mass spectrometry JSON files generated by Integrator
Visor for mass spectrometry JSON files generated by the Integrator program (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/jsonvisor3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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LaiaMotifs
Search for MHC-like motifs in peptide collections
Search for MHC-like motifs in peptide collections (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/laiamotifs3/code/ci/default/tree/README.md -
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AstroCamera
Raspberry Pi with HQ Camera for Astro Photography
Combine a Raspberry Pi 3 B+ with the HQ Camera (12 Megapixel). Make astronomical Photos and Videos with the Camera. -
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KimBlast
Blast+ the easy way
KimBlast GUI formats and indexes Fasta databases for Blast, performs Blast searches and analyzes results. Python 3.x version. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimblast3/code/ci/default/tree/README.md -
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Machine-Learning
kNN, decision tree, Bayesian, logistic regression, SVM
Machine-Learning is a repository focused on practical machine learning implementations in Python, covering classic algorithms like k-Nearest Neighbors, decision trees, naive Bayes, logistic regression, support vector machines, linear and tree-based regressions, and likely corresponding code examples and documentation. It targets learners or practitioners who want to understand and implement ML algorithms from scratch or via standard libraries, gaining hands-on experience rather than relying solely on black-box frameworks. This makes the repo suitable for students, hobbyists, or developers who want to deeply understand how ML algorithms work under the hood and experiment with parameter tuning or custom data. ... -
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Mininet
Emulator for rapid prototyping of Software Defined Networks
Mininet creates a realistic virtual network, running real kernel, switch and application code, on a single machine (VM, cloud or native), in seconds, with a single command. Because you can easily interact with your network using the Mininet CLI (and API), customize it, share it with others, or deploy it on real hardware, Mininet is useful for development, teaching, and research. Mininet is also a great way to develop, share, and experiment with Software-Defined Networking (SDN) systems using... -
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Awesome Graph Classification
Graph embedding, classification and representation learning papers
A collection of graph classification methods, covering embedding, deep learning, graph kernel and factorization papers with reference implementations. Relevant graph classification benchmark datasets are available. Similar collections about community detection, classification/regression tree, fraud detection, Monte Carlo tree search, and gradient boosting papers with implementations. -
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Awesome Community Detection Research
A curated list of community detection research papers
A collection of community detection papers. A curated list of community detection research papers with implementations. Similar collections about graph classification, classification/regression tree, fraud detection, and gradient boosting papers with implementations. -
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levin
in-memory key value server with fuzzy search capabilities
Levin is an event-based key/value server based on radix-tree (space optimized trie). Key search can be performed with an approximate key matching algorithm based on Levenshtein edit distance. -
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SageMaker MXNet Training Toolkit
Toolkit for running MXNet training scripts on SageMaker
SageMaker MXNet Training Toolkit is an open-source library for using MXNet to train models on Amazon SageMaker. For inference, see SageMaker MXNet Inference Toolkit. For the Dockerfiles used for building SageMaker MXNet Containers, see AWS Deep Learning Containers. For information on running MXNet jobs on Amazon SageMaker, please refer to the SageMaker Python SDK documentation. With the SDK, you can train and deploy models using popular deep learning frameworks Apache MXNet and TensorFlow.... -
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Forecasting Best Practices
Time Series Forecasting Best Practices & Examples
Time series forecasting is one of the most important topics in data science. Almost every business needs to predict the future in order to make better decisions and allocate resources more effectively. This repository provides examples and best practice guidelines for building forecasting solutions. The goal of this repository is to build a comprehensive set of tools and examples that leverage recent advances in forecasting algorithms to build solutions and operationalize them. Rather than... -
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MGFVisor
Visor for mass spectrometry MGF files
Visor for mass spectrometry MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/mgfvisor3/code/ci/default/tree/README.md -
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EasierMGF
Converts RAW Thermo Files into MGF files
Converts RAW Thermo Files into MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/easiermgf3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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Python4Proteomics Course
Python course for Proteomics analysis
Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md -
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KimPeptid
Analyzes Peptides Properties (Python 3 version)
Analyzes Peptides Properties (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimpeptid3/code/ci/default/tree/README.md -
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TCellXTalk
TCellXTalk Web-App from LP CSIC/UAB
TCellXTalk is a comprehensive database of experimentally detected phosphorylation, ubiquitination and acetylation sites in human T cells. The web-app at www.TCellXTalk.org makes TCellXTalk accessible from Internet, and enables the in silico prediction of potential co-modified peptides to facilitate their experimental detection, using targeted or directed mass spectrometry, for the study of protein post-translational modification cross-talk. More detailed information on TCellXTalk and... -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
...Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma can also be entered manually. Processed data can be saved as .csv file format. Designed by M Kanagasabapathy, Assistant Professor, Department of Chemistry, Rajus' College, Affiliated to Madurai Kamaraj University Rajapalayam (TN) India email: rrcmks(at)gmail.com -
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VGGFace2
VGGFace2 Dataset for Face Recognition
...Alongside the dataset, the repository provides pre-trained models based on ResNet-50 and SE-ResNet-50 architectures, trained with both MS-Celeb-1M pretraining and fine-tuning on VGGFace2. These models achieve strong verification performance on benchmarks such as IJB-B and include variants with lower-dimensional embeddings for compact feature representation. The project also includes preprocessing tools, face detection scripts, and etc. -
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Aida Lib
Aida is a language agnostic library for text generation
Aida is a language-agnostic library for text generation. When using Aida, first you compose a tree of operations on your text that includes conditions via branches and other control flow. Later, you fill the tree with data and render the text. A building block is a variable class: Var. Use it to represent a value that you want to control later. A variable can hold numbers (e.g. float, int) or strings. You can create branches and complex logic with Branch. -
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CCZero (中国象棋Zero)
Implement AlphaZero/AlphaGo Zero methods on Chinese chess
ChineseChess-AlphaZero is a project that implements the AlphaZero algorithm for the game of Chinese Chess (Xiangqi). It adapts DeepMind’s AlphaZero method—combining neural networks and Monte Carlo Tree Search (MCTS)—to learn and play Chinese Chess without prior human data. The system includes self-play, training, and evaluation pipelines tailored to Xiangqi's unique game mechanics. -
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pipupgrade
Like yarn outdated/upgrade, but for pip
pipupgrade is a command-line utility designed to streamline the management of Python package dependencies. It automates the process of identifying and upgrading outdated packages across various Python environments, including system-wide installations, virtual environments, and project-specific setups. By analyzing semantic versioning, pipupgrade categorizes updates into major, minor, and patch changes, allowing developers to make informed decisions about which packages to upgrade.... -
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porttree
Show dependences of a FreeBSD port as a pseudo graphic tree
For a given FreeBSD port, determine its dependences using any combination of the FETCH_, EXTRACT_, PATCH_, BUILD_, LIB_, RUN_ and TEST_DEPENDS, and show them as a pseudo graphical tree. Use back references for cross-connections. -
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UniCC LALR(1) Parser Generator
Parser generator, targetting C, C++, Python, JavaScript, JSON and XML
UniCC (UNIversal Compiler-Compiler) compiles an augmented grammar definition into a program source code that parses the described grammar. Because UniCC is intended to be target-language independent, it can be configured via template definition files to emit parsers in almost any programming language. UniCC comes with out of the box support for the programming languages C, C++, Python (both 2.x and 3.x) and JavaScript. Parsers can also be generated into JSON and XML. -
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Nelder Plot Designer
A Computer-aided Tool for Nelder Plot Design
Nelder plot (Nelder 1962) is an experimental design for testing a multiple tree spacings in a single plot. The shape of plot is circular with some number of concentric wheels or arcs radiating outward and the spokes connecting the center. The intersections of spokes and arcs are the tree positions. The tree position on different wheels represent a different the tree spacing distance or tree density. This design eliminates the need for separate experimental plots for each tree density. ...
