Search Results for "b-tree" - Page 5
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Showing 274 open source projects for "b-tree"
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Binarytree
Python library for studying Binary Trees
Binarytree is Python library that lets you generate, visualize, inspect and manipulate binary trees. Skip the tedious work of setting up test data, and dive straight into practicing algorithms. Heaps and BSTs (binary search trees) are also supported. Binarytree supports another representation which is more compact but without the indexing properties. Traverse trees using different algorithms. -
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Awesome Decision Tree Papers
A collection of research papers on decision, classification, etc.
A collection of research papers on decision, classification and regression trees with implementations. -
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BPYTOP
Linux/OSX/FreeBSD resource monitor
...It displays real-time usage and statistics for CPU, memory, disks, network, and processes, with colorful graphs and widgets that update at configurable intervals. Users can drill into a process list, sort by various metrics, view tree hierarchies, and quickly spot heavy resource consumers. The tool is highly configurable through both an in-app options menu and a detailed configuration file, allowing customization of themes, update frequency, graph types, temperature sensors, and which “boxes” (CPU, memory, network, processes) are shown. It supports temperature monitoring, per-core stats, I/O graphs, swap, battery information, and network auto-scaling, making it suitable for serious monitoring on laptops and servers alike. -
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Interpret-Text
State-of-the-art explainers for text-based machine learning models
A library that incorporates state-of-the-art explainers for text-based machine learning models and visualizes the result with a built-in dashboard. Interpret-Text builds on Interpret, an open source python package for training interpretable models and helping to explain blackbox machine learning systems. We have added extensions to support text models. Interpret-Text incorporates community-developed interpretability techniques for NLP models and a visualization dashboard to view the results.... -
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MoCo v3
PyTorch implementation of MoCo v3
MoCo v3 is a PyTorch reimplementation of Momentum Contrast v3 (MoCo v3), Facebook Research’s state-of-the-art self-supervised learning framework for visual representation learning using ResNet and Vision Transformer (ViT) backbones. Originally developed in TensorFlow for TPUs, this version faithfully reproduces the paper’s results on GPUs while offering an accessible and scalable PyTorch interface. MoCo v3 introduces improvements for training self-supervised ViTs by combining contrastive... -
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suc
Stack usage calculator
Calculates stack consumed by every application call tree using, as a primary source, different files generated during build. Checks completeness of collected data and supports manual input of those that are missing. -
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TensorNetwork
A library for easy and efficient manipulation of tensor networks
...It abstracts networks as nodes and edges, then compiles efficient contraction orders across multiple numeric backends so users can focus on model structure rather than index bookkeeping. Common network families (MPS/TT, PEPS, MERA, tree networks) are expressed with concise APIs that encourage experimentation and comparison. The library provides automatic path finding and cost estimation, exposing when contractions will explode in memory and suggesting better orders. Because it supports backends such as NumPy, TensorFlow, PyTorch, and JAX, the same model can run on CPUs, GPUs, or TPUs with minimal code changes. ... -
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Xmaldi
Viewing collections of MALDI spectra and perform PCA and DFA analyses
Xmaldi is an application for viewing collections of MALDI spectra and perform PCA and DFA analyses on them (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/xmaldi3/code/ci/default/tree/README.md -
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JSONVisor
Visor for mass spectrometry JSON files generated by Integrator
Visor for mass spectrometry JSON files generated by the Integrator program (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/jsonvisor3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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LaiaMotifs
Search for MHC-like motifs in peptide collections
Search for MHC-like motifs in peptide collections (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/laiamotifs3/code/ci/default/tree/README.md -
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AstroCamera
Raspberry Pi with HQ Camera for Astro Photography
Combine a Raspberry Pi 3 B+ with the HQ Camera (12 Megapixel). Make astronomical Photos and Videos with the Camera. -
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KimBlast
Blast+ the easy way
KimBlast GUI formats and indexes Fasta databases for Blast, performs Blast searches and analyzes results. Python 3.x version. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimblast3/code/ci/default/tree/README.md -
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Machine-Learning
kNN, decision tree, Bayesian, logistic regression, SVM
Machine-Learning is a repository focused on practical machine learning implementations in Python, covering classic algorithms like k-Nearest Neighbors, decision trees, naive Bayes, logistic regression, support vector machines, linear and tree-based regressions, and likely corresponding code examples and documentation. It targets learners or practitioners who want to understand and implement ML algorithms from scratch or via standard libraries, gaining hands-on experience rather than relying solely on black-box frameworks. This makes the repo suitable for students, hobbyists, or developers who want to deeply understand how ML algorithms work under the hood and experiment with parameter tuning or custom data. ... -
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Awesome Graph Classification
Graph embedding, classification and representation learning papers
A collection of graph classification methods, covering embedding, deep learning, graph kernel and factorization papers with reference implementations. Relevant graph classification benchmark datasets are available. Similar collections about community detection, classification/regression tree, fraud detection, Monte Carlo tree search, and gradient boosting papers with implementations. -
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Mininet
Emulator for rapid prototyping of Software Defined Networks
Mininet creates a realistic virtual network, running real kernel, switch and application code, on a single machine (VM, cloud or native), in seconds, with a single command. Because you can easily interact with your network using the Mininet CLI (and API), customize it, share it with others, or deploy it on real hardware, Mininet is useful for development, teaching, and research. Mininet is also a great way to develop, share, and experiment with Software-Defined Networking (SDN) systems using... -
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Awesome Community Detection Research
A curated list of community detection research papers
A collection of community detection papers. A curated list of community detection research papers with implementations. Similar collections about graph classification, classification/regression tree, fraud detection, and gradient boosting papers with implementations. -
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levin
in-memory key value server with fuzzy search capabilities
Levin is an event-based key/value server based on radix-tree (space optimized trie). Key search can be performed with an approximate key matching algorithm based on Levenshtein edit distance. -
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SageMaker MXNet Training Toolkit
Toolkit for running MXNet training scripts on SageMaker
SageMaker MXNet Training Toolkit is an open-source library for using MXNet to train models on Amazon SageMaker. For inference, see SageMaker MXNet Inference Toolkit. For the Dockerfiles used for building SageMaker MXNet Containers, see AWS Deep Learning Containers. For information on running MXNet jobs on Amazon SageMaker, please refer to the SageMaker Python SDK documentation. With the SDK, you can train and deploy models using popular deep learning frameworks Apache MXNet and TensorFlow.... -
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Forecasting Best Practices
Time Series Forecasting Best Practices & Examples
Time series forecasting is one of the most important topics in data science. Almost every business needs to predict the future in order to make better decisions and allocate resources more effectively. This repository provides examples and best practice guidelines for building forecasting solutions. The goal of this repository is to build a comprehensive set of tools and examples that leverage recent advances in forecasting algorithms to build solutions and operationalize them. Rather than... -
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MGFVisor
Visor for mass spectrometry MGF files
Visor for mass spectrometry MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/mgfvisor3/code/ci/default/tree/README.md -
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EasierMGF
Converts RAW Thermo Files into MGF files
Converts RAW Thermo Files into MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/easiermgf3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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Python4Proteomics Course
Python course for Proteomics analysis
Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md -
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KimPeptid
Analyzes Peptides Properties (Python 3 version)
Analyzes Peptides Properties (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimpeptid3/code/ci/default/tree/README.md -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
...Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma can also be entered manually. Processed data can be saved as .csv file format. Designed by M Kanagasabapathy, Associate Professor, Department of Chemistry, Rajus' College, Affiliated to Madurai Kamaraj University Rajapalayam (TN) India email: rrcmks(at)gmail.com -
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TCellXTalk
TCellXTalk Web-App from LP CSIC/UAB
TCellXTalk is a comprehensive database of experimentally detected phosphorylation, ubiquitination and acetylation sites in human T cells. The web-app at www.TCellXTalk.org makes TCellXTalk accessible from Internet, and enables the in silico prediction of potential co-modified peptides to facilitate their experimental detection, using targeted or directed mass spectrometry, for the study of protein post-translational modification cross-talk. More detailed information on TCellXTalk and...
