Search Results for "research" - Page 46
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Showing 2809 open source projects for "research"
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Microarray Integrator (MAI)
Microarray Integrator for heterogeneous human/mouse Affymetrix arrays
The Microarray Integrator is freely available programs to integrate heterogeneous Affymetrix microarrays for human and mouse. The cell-type-specific genes or condition-specific genes can be screened in the integrated microarrays by MAI result. -
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Collaborative Computing Project for NMR
Collaborative Computing Project for NMR (CCPN)
The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of... -
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relay_control
easy control for the masla relay devices
A nice and simple solution to control and test the masla.de relay devices. It provides a schematic or overview to easy switch relays on or off. The USB interface of the devices makes a connection easy. Written in python and use of pygtk and pyserial it can be used flexible on several platforms. And it's just a example to control the relay-devices to help you write your own program. -
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This is an implementation of post-process phonon analyzer, which calculates crystal phonon properties from input information calculated by external codes, e.g., first-principles calculation code.
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nmr-nessy
NMR relaxation dispersion spectroscopy analysis software
NESSY is an open source software to analyse NMR relaxation dispersion data of either CPMG or R1p (R1rho) dispersion experiments. The graphical interface enables simple management of large experimental data sets and simple and automated analysis. NESSY automatically calculates effective transverse relaxation rate (R2eff) and performs model selection between different relaxation dispersion models. -
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!!! PTEROS DEVELOPMENT MOVED TO GITHUB !!! New project page: https://github.com/yesint/pteros New documentation page: https://yesint.github.io/pteros/ Pteros is the C++ library for custom molecular modeling and simulations codes designed for researchers, not for C++ gurus. Provides facilities for PDB, XTC and TRR files IO, powerful selections, geometry transformations, RMSD fitting and alignment, etc.
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The Helsinki Finite-State Transducer toolkit is intended for processing natural language morphologies. The toolkit is demonstrated by wide-coverage implementations of a number of languages of varying morphological complexity.
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SloppyCell is a complete environment for building models of biochemical systems, fitting them to data, and extracting falsifiable predictions via a parameter ensemble. SBML l2v1 compatible.
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PyVE
PyVE is image analysis and visualization environment
PyVE is image analysis and Visualization Environment focused at clinical use. At the core of it there is a powerful viewer for displaying 3D datasets (MRI, PET, CT) based on VTK. It all comes precompiled allowing painless access to Python (2.x), the ITK toolkit for image analysis, numpy/scipy for numerical calculations, Qt and PyQt4 for the development Graphical User Interfaces. It is what you need for fast prototyping and development of more complex projects. -
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Ambulant is an extensible cross-platform multimedia playback engine in C++, aimed primarily at playback of SMIL documents.
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LER&LWR Calculator
Tool for line edge parameters calculation
Load a folder with images from raster electron microscope, choose necessary options and let the algorythm calculate the characteristics of the line. -
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siFi21
si-Fi is a Software for RNAi (RNA interference) off-target prediction.
si-Fi is a Software for RNAi (RNA interference) off-target prediction The software is designed for checking long-double stranded RNAi constructs for target specificity and silencing efficiency. It can be used also to select sequence regions suitable for designing RNAi constructs. The program provides clear tabular and graphical outputs. -
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Composight is a cross-platform toolkit for 3D-image processing in the domain of composite materials science. It is written in C++ and provides small, problem-specific applications for viewing, filtering and segmentation of volumetric data such as micro-CT scans. The main objective is not to provide yet another complex application for volume data visualization and medical image processing. Instead, Composight is a collection of small and simple apps that have already been successfully used to...
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Blivion
Blivion: BioLayer Interferometry Virus On (only)
Blivion is a software tool for analysing biolayer interferometry measurements of the binding of large vesicles such as influenza virus onto a two-dimensional ligand-coated substrate. -
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ufov
Enhance useful field of view, speed of responsiveness, brain exerciser
Python and pygame cross platform program to exercise the brain with the intention of enhancing useful field of view, also known as speed of responsiveness. This yields benefits in driving, motility, and even depressive symptoms, as described in research papers of randomized, double blind trials. Whether ufov exercise the brain to yield those benefits is unknown, since there are no research studies using it. The research is conducted with a commercial product that I have not seen or used. I used the description of what useful field of view is supposed to do to create this program for experimental purposes. ... -
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That project aims at providing a clean API, and the corresponding C++ implementation, for the basis of Airline IT Business Object Model (BOM), ie, to be used by several other Open Source projects, such as RMOL, Air-Sched, Travel-CCM, OpenTREP, etc.
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Training Image Operators from Samples
Tools to train Image Operators automatically from a set of samples.
TRIOS - Training Image Operators from Samples is a set of tools to bring Image Processing closer to scientists in general. It is capable of estimating an operator between two images using only pairs of samples that contain an input image and the desired output. The operator is saved to a file and can be applied to any image. -
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CIGI Compliance Tools
Tools for Testing IG CIGI Compliance
Tools for testing CIGI IG and host implementations against the CIGI standard. -
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DSTK - DataScience ToolKit
DSTK - DataScience ToolKit for All of Us
DSTK - DataScience ToolKit is an opensource free software for statistical analysis, data visualization, text analysis, and predictive analytics. Newer version and smaller file size can be found at: https://sourceforge.net/projects/dstk3/ It is designed to be straight forward and easy to use, and familar to SPSS user. While JASP offers more statistical features, DSTK tends to be a broad solution workbench, including text analysis and predictive analytics features. Of course you may specify... -
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NGSolve is a general purpose Finite Element Library on top of Netgen. With the basic library one can solve heat flow equations, Maxwell equations, and solid mechanical problems. Several add-ons are available for particular application classes. New paper: J. Schöberl: "C++11 Implementation of Finite Elements in NGSolve", ASC Report 30/2014, Institute for Analysis and Scientific Computing, Vienna University of Technology,...
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EQGRP
Decrypted content of eqgrp-auction-file.tar.xz
...The tools include network exploitation scripts, backdoors, and frameworks targeting a range of platforms and services, many of which highlight previously unknown vulnerabilities. While the repository itself is provided for educational and research purposes, it also reflects a significant historical moment in cybersecurity, influencing both defensive strategies and awareness of advanced persistent threats. The release offers researchers insight into real-world offensive techniques, though many of the specific exploits are now outdated or patched. EQGRP remains a controversial but important resource for studying the evolution of nation-state-level cyber operations. -
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Neural Photo Editor
A simple interface for editing natural photos
Neural Photo Editor is an experimental machine learning application that demonstrates how generative neural networks can be used as an interactive photo editing tool. The project implements the system described in the research paper Neural Photo Editing with Introspective Adversarial Networks, which introduces a generative model capable of modifying images in semantically meaningful ways. Instead of editing images by directly manipulating pixels, the software allows users to influence changes in the latent space of a trained generative model. This approach enables large and coherent modifications to images while preserving visual realism. ...
