Search Results for "odin-tool" - Page 42
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Showing 2019 open source projects for "odin-tool"
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Unsupervised Random Forest
On-line Unsupervised Random Forest
This tool uses Random Forest and PAM to cluster observations and to calculate the dissimilarity between observations. It supports on-line prediction of new observations (no need to retrain); and supports datasets that contain both continuous (e.g. CPU load) and categorical (e.g. VM instance type) features. In particular, we use an unsupervised formulation of the Random Forest algorithm to calculate similarities and provide them as input to a clustering algorithm. -
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privacyidea
two factor authentication management system
privacyIDEA is a management and authentication system for two factor authentication. You can use OTP tokens, OTP cards, SMS, Smartphone Apps to incorparte the second factor. It can even manage SSH keys and supports Offline OTP. The latest version can manage and enroll user certificates. Its modular design makes it easily enhancable. It runs on Linux. Applications and workflows can be connected to privacyIDEA hence enabling two factor authentication in your system logon, web... -
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MicrobeGPS
The Explorative Taxonomic Profiling Tool for Metagenomic Data
MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily. -
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This (Python) tool allows you to easily create FPGA bitfiles for your embedded system, from several Open Source IPs (compatibles with the OpenCores Wishbone bus) . It will also generates the corresponding drivers (currently only Linux ones).
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AI-generated apps that pass security reviewRetool lets you generate dashboards, admin panels, and workflows directly on your data. Type something like “Build me a revenue dashboard on my Stripe data” and get a working app with security, permissions, and compliance built in from day one. Whether on our cloud or self-hosted, create the internal software your team needs without compromising enterprise standards or control.
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irit_diff_sequences
Python tool to create lifespan sequences from Wikipedia edits history
A Python tool which produced lifespan sequences from edits history. The tool is first developed for the Wikipedia edits history but can easily be adapted for others applications. From a database containing for each article its list of revisions, produce one csv file per article containing authored sequences and lifespans. Output format: i,j,lifespan,author with - i : begining of the chars sequence - j : end of the chars sequence - lifespan : number of edits the sequence has survives until the lattest revision - author : author id of the sequence. -
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PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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dhcpclientsimulator
Both a DHCP client simulator and a DHCP attack tool.
#DHCP Client Simulator For the DHCP client simulator mode, assuming there is an active DHCP server on the network, the user can choose to simulate any number of DHCP clients. All DHCP leases obtained from the server are saved in the DHCP_Leases.txt file, which is automatically generated by the program. The user can also release the leases received from the server, either one by one (by IP address) or all of them at once. After releasing all the addresses, the DHCP_Leases.txt file is... -
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pipasic
pipasic: Protein Abundance Correction in Metaproteomic Data
...These challenges are similar but not identical to the challenges arising in the analysis of metagenomic samples and require specific solutions. pipasic (peptide intensity-weighted proteome abundance similarity correction) is a tool which corrects identification and spectral counting based quantification results using peptide similarity estimation and expression level weighting within a non-negative lasso framework. pipasic has distinct advantages over approaches only regarding unique peptides or aggregating results to the lowest common ancestor. -
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huhamhire-hosts
hosts for Internet Freedom
...It also provides both support for Graphical Desktop environment with Graphical User Interface (GUI) and CLI environment with Text-based User Interface (TUI). Users could use these tool to modify the hosts to visit specified websites or services blocked by ISP/government. Functions which help users to backup/restore hosts files are also provided. For more detailed information, please visit the website of this project. -
Atera all-in-one platform IT management software with AI agentsAtera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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*WARNING* gtburst moved to github (https://github.com/giacomov/gtburst). ########################################## gtBurst is a tool to download data, analyze and simulate Gamma-ray Bursts and Solar Flares as observed by the NASA Fermi satellite.
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...ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract
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isbntools
A command line tool to extract, transform and get metadata for ISBNs
As of 2015-06-02, this project is no longer under active development. -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade-defining polymorphism. ... -
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MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
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EasyRepo
Offline DVDs software repository builder for Ubuntu and derivatives
Easy Repo is a GUI tool for create APT repository on DVD disks for your Debian/Ubuntu system. It can be usefull to use Ubuntu Software Center without an internet connectivity. Program is written in python/GTK+ and considered to be portable to win/mac as well. -
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CONTIGuator is a Python script for Linux environments whose purpose is to speed-up the bacterial genome assembly process and to obtain a first insight of the genome structure using the well-known artemis comparison tool (ACT).
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StoryText (formerly PyUseCase) is an unconventional GUI testing tool, with support for PyGTK, Tkinter, wxPython, Swing, SWT and Eclipse RCP. Instead of recording GUI mechanics directly, it asks the user for descriptive names and hence builds up a "domain language" along with a "UI map file" that translates it into the current GUI layout. The point is to reduce coupling, allow very expressive tests, and ensure that GUI changes mean changing the UI map file but not all the tests. ...
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CCH
A genetics tool that identifies genomic regions of shared ancestry
Combinatorial Conflicting Homozygosity (CCH) uses dense Single Nucleotide Polymorphism (SNP) genotypes to identify regions of the genome inherited from a common ancestor among any or all subsets of a group. Analysis is rapid and can identify loci containing genes for dominant traits. CCH is robust to the presence of phenocopies and can detect undisclosed shared common ancestry. The associated publication regarding CCH may be accessed... -
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LipidWrapper
Create lipid-bilayer models of arbitrary geometry.
...Amaro, is capable of creating curved membrane models with geometries derived from various possible sources, both experimental and theoretical. We are hopeful that this utility will be a useful tool for the computational-biology community. -
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UniPyRange
Tool to fetch protein/DNA truncation constructs from Uniprot DB
Very simple python script which saves you the pains of counting the amino acids/DNA bases in fasta files from the Uniprot and NCBI RefSeq Database (1, 2). Lets say you want the amino acid sequence of range 128-387 from a 1000 amino acid protein - this script will help you to avoid counting mistakes by just showing you the specified sequence in amino acids and coding DNA base pairs (ideal for amplification primer design) of a specified Uniprot ID. - Requires BioPython (3) and Bioservices... -
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IncludeGraph
Determine which files get included in source files.
IncludeGraph is a tool written in Python that performs code analysis on a C and C++ source tree. It can determine the inclusion path for a header file as well as provide charts about which headers are the most included ones or which files include the most headers. It also has a limited knowledge of conditional preprocessor constructs by implementing a subset of the functionality of the C preprocessor. -
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VADER
Lexicon and rule-based sentiment analysis tool
VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool designed for analyzing the sentiment of text, particularly in social media and short text formats. It is optimized for quick and accurate analysis of positive, negative, and neutral sentiments. -
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simple line command tool send several trames over TCP lan in AF_INET SOCK_STREAM and return elapsed times. usage: (pytestlan) ser IP PORT usage: (pytestlan) cli IP PORT nb_of_loop data_size example server: python pytestlan.py ser localhost 50000 example server: pytestlan.pyc ser 192.168.0.37 50000 example client (windows): pytestlan.exe cli 192.168.0.12 50000 1000 100 tested on linux, WinXP, Win7 Seven, 2008 Server.
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ADTEx
Aberration detection in tumour exome
Aberration Detection in Tumour Exome (ADTEx) is a tool for copy number variation (CNV) detection for whole-exome data from paired tumour/matched normal samples. -
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VEEL
Visualize Estimates of Exponential Learning
VEEL is a simple tool to make plots of exponential learning curves for behavioral experiments. It also provides parameter estimates in output files.
