Search Results for "a line" - Page 35
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Showing 2519 open source projects for "a line"
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LinuxSA
Linux security assessment tool.
LinuxSA is a Python project that scans a remote or a local Linux machine for security vulnerabilities and then creates a report of the findings. The scan is read-only and no modifications are made to the target system. -
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Maximum Common Genome Alignment (MCGA)
Pipeline for creating core genome alignments for phylogenetic analysis
Maximum Common Genome Alignment (MCGA) Tool MCGA is a bioinformatics analysis tool written in Python for generating core genome alignment for bacterial whole genome sequences which can be used to construct phylogenetic trees. -
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Collective Mind Technology
plugin-based framework for systematic and reproducible experimentation
New version moved to http://github.com/ctuning/ck Collective Mind framework (cM) is an open-source plugin-based schema-free repository and infrastructure for collaborative, systematic and reproducible research and experimentation. This 3rd version (started in 2006) helps to implement, preserve, share and reproduce the whole experimental setup as connected modules and data. cM uses crowdsourcing to leverage knowledge and computational resources of multiple users. For example, it... -
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the "Simple Password Displayer" is a multiuser password managing software based on GnuPG, so every user has his own password to decrypt/sign the container.
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The complete IT asset and license management platformThe platform seamlessly integrates with 100+ IT systems, including MDM, RMM, IDP, SSO, HR, finance, helpdesk tools, and more.
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QuickNXS
Polarized ToF reflectivity raw data analysis tool
Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps. -
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PyLucid is a Open Source web content management system written in Python using the Django Framework. fully customizable output, expandable with plugins, i18n, L10n, Revision controled, support many database engines, WSGI conform and many more...
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scipion-xmipp
Image processing framework to integrate EM software packages.
...Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs. -
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...ADOMA is a commandline program that can easily be used in pipelines. For more information check the README.md in the Files section. How to cite ADOMA: Zaal, D. and Nota, B. (2016), ADOMA: A Command Line Tool to Modify ClustalW Multiple Alignment Output. Mol. Inf., 35: 42–44. doi: 10.1002/minf.201500083 http://onlinelibrary.wiley.com/doi/10.1002/minf.201500083/abstract
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wordaxe (formerly deco-cow): A hyphenation library for Python. Several hyphenation algorithms: - the pattern-based from TeX/OOO, - by decomposition of compound words for German language. Includes support for paragraph line-breaking with ReportLab.
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Fluid2D
Fluid2D is the Swiss army knife of 2D CFD
Fluid2D allows to study a wide variety of 2D flows. It is written entirely in Python. It is both a teaching code and a research code, capable of running from one core to thousands. Its numerics has been chosen to yield to as small dissipation as possible allowing to simulate easily high Reynolds flows, much higher than any of its concurrents. High performances are achieved by writting most of the operations as matrix-vector multiplications, handled by numpy that itself relies on the highly... -
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This (Python) tool allows you to easily create FPGA bitfiles for your embedded system, from several Open Source IPs (compatibles with the OpenCores Wishbone bus) . It will also generates the corresponding drivers (currently only Linux ones).
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isbntools
A command line tool to extract, transform and get metadata for ISBNs
As of 2015-06-02, this project is no longer under active development. -
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pyFreeDnsUpdate
FreeDNS update python script
pyFreeDnsUpdate is a command line python script that updates the FreeDNS record for a given domain to the current public facing IP address detected by the local host. It requires a one time edit to configure a list of domain|api_key pairs, and after that it can be run as a chron job to perform a sync check and update push if needed. Activity is logged on a local text file, and DEBUG level can be enabled in case of troubles. -
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Secure Hex Message Encoder/Decoder
Secure dem messages!
ATTENTION!!!!!! If you downloaded this before 12:12 PM Central Time on April 26, 2015, PLEASE RE-DOWNLOAD!!! A virus had slipped in undetected, and I have DISINFECTED the new copy that has been posted! PLEASE RE-DOWNLOAD IMMEDIATELY!!! That is all. This python program uses a universal key to encrypt and decrypt messages. You can use this program to decode messages made using any other iteration! Output for encoding is called "encrypted_message.axfile" Output for decoding is... -
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dhcpclientsimulator
Both a DHCP client simulator and a DHCP attack tool.
#DHCP Client Simulator For the DHCP client simulator mode, assuming there is an active DHCP server on the network, the user can choose to simulate any number of DHCP clients. All DHCP leases obtained from the server are saved in the DHCP_Leases.txt file, which is automatically generated by the program. The user can also release the leases received from the server, either one by one (by IP address) or all of them at once. After releasing all the addresses, the DHCP_Leases.txt file is... -
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pipasic
pipasic: Protein Abundance Correction in Metaproteomic Data
Metaproteomic analysis allows studying the interplay of organisms or functional groups and has become increasingly popular also for diagnostic purposes. However, difficulties arise due to the high sequence similarity between related organisms. Further, the state of conservation of proteins between species can be correlated with their expression level which can lead to significant bias in results and interpretation. These challenges are similar but not identical to the challenges arising in... -
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fitGCP
Fitting genome coverage distributions with mixture models
Genome coverage, the number of sequencing reads mapped to a position in a genome, is an insightful indicator of irregularities within sequencing experiments. While the average genome coverage is frequently used within algorithms in computational genomics, the complete information available in coverage profiles (i.e. histograms over all coverages) is currently not exploited to its full extent. Thus, biases such as fragmented or erroneous reference genomes often remain unaccounted for.... -
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subnetcalculator
Basic subnet calculator written in Python.
Based on the IP address and subnet mask input from the user, the following values are calculated: #1. Network address #2. Broadcast address #3. Number of valid hosts #4. Wildcard mask #5. Number of mask bits (CIDR notation) #6. Random IP addresses from the subnet. -
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**(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
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wd2epub
wd2epub creates epub file from the set of html files
Set of python scripts to create epub files from a copy of website in your disk (e.g. by wget). -
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netcfgtoolssh
Python script for pushing the same configuration on multiple devices.
Python script for pushing the same configuration (stored in a predefined file) on multiple devices at the same time via SSHv2. The script reads the IPs of the devices from the NETWORK_IP file, then gets the SSHv2/Telnet credentials from the SSH_USERPASS file and sends the commands you enter in the CMD_FILE file to all the devices. The script also checks if all the needed files exist, if all the IP addresses are valid and if all the devices are reachable. Tools used: Python 2.7.3,... -
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netcfgtooltelnet
Python script for pushing the same configuration on multiple devices.
Python script for pushing the same configuration (stored in a predefined file) on multiple devices at the same time via Telnet. The script reads the IPs of the devices from the NETWORK_IP file and sends the commands you enter in the CMD_FILE file to all the devices. Telnet username/password parameters are configured within the script. This feature can be further customized to prompt the user for them or read them from a file. The script also checks if all the needed files exist, if... -
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netmonsql
Network performance monitoring and logging script for Cisco devices.
NetMon_Cisco_to_SQL.py is a basic network performance monitoring and logging script for Cisco devices. It gathers parameters (CPU Utilization, Used Processor Memory, Used IO Memory, UP Ethernet Interfaces density, in percent velues) from Cisco routers by parsing command outputs and exports them to a MySQL database. NetMon_Query.py is a query script for the MySQL database in the form of an interactive menu for generating statistics. Tools used for coding and testing: Python 2.7.3,... -
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ospfdiscoverysnmp
OSPF network discovery script via SNMP.
OSPF_SNMP_v1.0.py is an OSPF network discovery script. It allows the discovery of all OSPF network devices in the network, without connecting to each of them or knowing all their IP addresses. The user must provide the IP and SNMP community string of a single OSPF device in the network (for example, a device in the core) and the script searches for all other OSPF routers. Prior to running the script, the user should configure SNMPv2 community string on the device and also include the subnet... -
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ccwatcher
A computational chemistry monitoring, parsing and plotting application
ccwatcher monitors the progress of computational chemistry calculations during runtime. It has both a GUI and a "Command Line Interface" to which it parses important output and plots SCF energies.
