Search Results for "network analysis" - Page 3
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Showing 139 open source projects for "network analysis"
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Pretty Damn Quick (PDQ) analytically solves queueing network models of computer and manufacturing systems, data networks, etc., written in conventional programming languages. Generic or customized reports of predicted performance measures are output.
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Frontend Regression Validator (FRED)
Visual regression tool used to compare baseline and updated instances
Visual regression tool used to compare baseline and updated instances of a website in a deployment pipeline. FRED is an opensource visual regression tool used to compare two instances of a website. FRED is responsible for automatic visual regression testing, with the purpose of ensuring that functionality is not broken by comparing a current(baseline) and an updated version of a website. The visual analysis computes the Normalized Mean Squared error and the Structural Similarity Index on the... -
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NLP-Models-Tensorflow
Gathers machine learning and Tensorflow deep learning models for NLP
NLP-Models-Tensorflow is a collection of natural language processing model implementations built using the TensorFlow deep learning framework. The repository provides numerous examples of neural network architectures used in modern NLP research and applications, including text classification, language modeling, machine translation, and sentiment analysis. Each model implementation is designed to illustrate how common NLP architectures operate, such as recurrent neural networks, convolutional models for text processing, and transformer-style attention mechanisms. ... -
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CBMPy
PySCeS Constraint Based Modelling
...CBMPy implements popular analyses such as FBA, FVA, element/charge balancing, network analysis and model editing as well as advanced methods developed for the ecosystem modelling. CBMPy supports user interaction via: - interactive console or as a library for advanced use - GUI, visual representation of the model, analysis methods - a SOAP based webAPI exposes high level functionality via web services -
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LymPHOS2
LymPHOS2 Web-App
LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes... -
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DenyHosts is a python program that automatically blocks ssh attacks by adding entries to /etc/hosts.deny. DenyHosts will also inform Linux administrators about offending hosts, attacked users and suspicious logins. This project is being actively developed on GitHub (https://github.com/denyhosts)
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Affine Transformation of Virtual Object
Transformation virtual 3D object using a finger gesture-based system
...This is the version 2.0 that includes a more generalized affine transformation of virtual objects in the virtual environment with more experimentation and analysis. Previous versions only include the geometric transformation of a virtual 3D object with respect to a finger gesture. Paper for the affine transformation of the virtual 3D object has been published in Virtual Reality & Intelligent Hardware, Elsevier Science Publishers in 2020. -
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jieba
Stuttering Chinese word segmentation
"Jaba" Chinese word segmentation, do the best Python Chinese word segmentation component. Four word segmentation modes are supported. Precise mode, which tries to cut the sentence most precisely, suitable for text analysis. Full mode, scans all the words that can be formed into words in the sentence, the speed is very fast, but the ambiguity cannot be resolved. The search engine mode, on the basis of the precise mode, divides the long words again to improve the recall rate, which is suitable for word segmentation in search engines. The paddle mode uses the PaddlePaddle deep learning framework to train the sequence labeling (bidirectional GRU) network model to achieve word segmentation. ... -
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NiftyNet
An open-source convolutional neural networks platform for research
An open-source convolutional neural networks platform for medical image analysis and image-guided therapy. NiftyNet is a TensorFlow-based open-source convolutional neural networks (CNNs) platform for research in medical image analysis and image-guided therapy. NiftyNet’s modular structure is designed for sharing networks and pre-trained models. Using this modular structure you can get started with established pre-trained networks using built-in tools. Adapt existing networks to your imaging... -
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Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
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Xplico
Xplico is a Network Forensic Analysis Tool (NFAT)
Xplico is a Network Forensic Analysis Tool (NFAT). The goal of Xplico is extract from an internet traffic capture the applications data contained. For example, from a pcap file Xplico extracts each email (POP, IMAP, and SMTP protocols), all HTTP contents, each VoIP call (SIP, MGCP, MEGACO, RTP), IRC, WhatsApp... Xplico is able to classify more than 140 (application) protocols. -
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IDEA (Text Data Visualizer)
Text Data Visualizer with Django
It is hard for non-developer to visualize data. But if you use IDEA, you can visualize data easily. If you want to test Project: IDEA locally on your environment, you require mecab-ko and mecab-ko-dic. If you have some data which you want to visualize, just put it in IDEA. Then click the Visualization button! -
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dadosSemiotica
Collecter and manager of semiotica annalisis data
This program is a web application to collect and organize data of text analysis. It works with sets of texts and the analysis are done on portions of the length of a sentence. One of the preprocessing modules is based on CoGroo (A LibreOffice & OpenOffice.org Portuguese Grammar Checker). -
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survol
RDF-based framework monitoring business systems activity
A Python agent and a web interface aiming to help the analysis and investigation of a legacy application. A set of machines, processes, databases, programs etc ... all communicating with each other, manipulating your data, and whose software architecture has become, with time, complicated, difficult to understand, and undocumented. Data are aggregated with an RDF inference engine, creating a global vision of the business information processing. -
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PassGAN
A Deep Learning Approach for Password Guessing
...The maintainer also documented experimental results and questioned how the approach compared with established RNN and Markov methods. Because generated candidates can be used in password-recovery attacks, the software is most appropriate for authorized security research and password-strength analysis. -
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cnn-benchmarks
Benchmarks for popular CNN models
The cnn-benchmarks project is a collection of benchmarking scripts designed to evaluate the performance of convolutional neural networks across different hardware and configurations. It provides standardized implementations of popular CNN architectures, enabling developers to measure training speed, memory usage, and computational efficiency. The project focuses on reproducibility, allowing consistent comparisons between models and environments. It is particularly useful for testing GPUs and... -
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EDCC-CNG
Exploration and categorization of CREs and CRMs
Cis-regulatory elements (CREs) and cis-regulatory modules (CRMs) play an important role in temporal and spatial regulation of gene expression, which is a common process in eukaryotic organisms. We developed two programs that serve as exploratory tools in the analysis of CRM-mediated control of gene expression: “Exploration of Distinctive CREs and CRMs” (EDCC) and “CRM Network Generator” (CNG). EDCC correlates the presence and positions of CREs/CRMs with gene expression data and identifies candidate regulatory elements for further functional analysis. CNG provides an unbiased neural network approach to assess the importance of positional features that were determined by EDCC. ... -
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Needle
The iOS Security Testing Framework
Needle is an open-source, modular framework to streamline the process of conducting security assessments of iOS apps. Needle was originally made to work with iOS 9 and iOS 10. Since then, Frida was released and become the defacto tool to use with mobile security assessments. Some common Frida mobile security scripts were later implemented within Needle, as some of these scripts worked better or addressed some issues that were present in Needle's custom tooling. Assessing the security of an... -
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bulbea
Deep Learning based Python Library for Stock Market Prediction
bulbea is an open-source Python library designed for financial analysis and stock market prediction using machine learning and deep learning techniques. The library provides tools for retrieving financial time series data, preprocessing market data, and training predictive models that estimate future price movements. bulbea integrates common machine learning frameworks such as TensorFlow and Keras to build neural network models capable of learning patterns in historical financial data. ... -
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AlienVault OSSIM
Open Source SIEM
OSSIM, AlienVault’s Open Source Security Information and Event Management (SIEM) product, provides event collection, normalization and correlation. For more advanced functionality, AlienVault Unified Security Management (USM) builds on OSSIM with these additional capabilities: * Log management * Advanced threat detection with a continuously updated library of pre-built correlation rules * Actionable threat intelligence updates from AlienVault Labs Security Research Team * Rich... -
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CorNetMap
A tool for Gene Expression Correlation Network
Capabilities of CorNetMap: 1. Read data as tab-delimited text file. Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file. How to use and doccumentation: https://sourceforge.net/projects/cornetmap/files/Documentation_corNetMap.pdf Sample data for testing: https://sourceforge.net/projects/cornetmap/files/Test%20Data/ Citation: Cite CornetMap as " Khaund, A. ... -
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mod_openopc
just plain WORKS
mod_openopc is a full featured implementation of the OpenOPC library for Python. It is cross platform compatible (full Python 2.5 and up). We used to recommend running it on a POSIX platform (Unix / Linux), but thanks to modest efforts since 2014, performance in Windows OS environments is excellent. -
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...From the user's perspective, MDP is a collection of supervised and unsupervised learning algorithms and other data processing units that can be combined into data processing sequences and more complex feed-forward network architectures. From the scientific developer's perspective, MDP is a modular framework, which can easily be expanded. The implementation of new algorithms is easy and intuitive. The new implemented units are then automatically integrated with the rest of the library. The base of available algorithms is steadily increasing and includes signal processing methods (Principal Component Analysis, Independent Component Analysis, Slow Feature Analysis), manifold learning methods ([Hessian] Locally Linear Embedding), several classifiers, probabilistic methods (Factor Analysis, RBM), data pre-processing methods, and many others.
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ExAM-Exome_Analysis_And_Mining
A whole exome sequencing analysis package and its graphical interface
During the past few years, whole exome sequencing has imposed itself for genetic research, largely due to its use for detection of causative mutations responsible for Mendelian disorders. As a consequence of their power and of the rapidly decreasing cost of these technologies, massive amount of exome sequencing data are generated and becoming available to a broadening community of scientists. However, these data remain difficult to analyze and interpret by the general scientific community,... -
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NetView P
Population Genomics Network Analysis Pipeline
NetView P has been re-structured as a package for R and moved to GitHub: https://github.com/esteinig/netview
