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This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
In Systems Biology models are created in various formats (Matlab, Java, C/C++, Python, ...). "Annotate Your Model" will help you to link your model to biological web resources by creating a CSV file containing MIRIAM annotations.
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A cross-platform library that computes fast and accurate SIFT image features. libsiftfast provides Octave/Matlab scripts, a command line interface, and a python interface (siftfastpy). Optimized with SIMD instructions and OpenMP .
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Axon Library (libaxon) is an Open Source, cross-platform, C++ library for reading files in Axon Binary Format. Currently only ABF2 is supported. Additionally, project include binders for Python and Matlab.
The NUMIPAD library implements several methods/algorithms to solve inverse problems and adaptive decomposition (i.e. Tikhonov regularization, Total Variation, Basis Pursuit, etc.)
Matlab/Octave to Python conversion facility. The tool will take existing scripts
and convert them to Python. Also includes Python bindings to Octave and
a small runtime support library. Built on top of Numeric Python extensions.
MatPy is a Python package for numerical linear algebra and plotting with a
MatLab-like interface. It currently consists of wrappers around Numeric and
Gnuplot packages, but eventually may be implemented directly in C/C++, or as
interface to Octave.
Python Arrays is a project to reimplement the existing Python Numeric
module which adds the ability to efficiently manipulate large
numeric arrays in ways similar to Matlab and IDL.
This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.
Central schemes offer a simple and versatile approach for computing approximate solutions of non-linear systems of hyperbolic conservation laws and related PDEs.
libGo is a C++ class library containing all kinds of
things that proved useful to me.
Included are:
- Linear algebra, using LAPACK and CBLAS
- V4L(1) image grabber
- Multithreading
- Image containers (up to 3D)
- Some simple optimisation code
- Python embedding helper
- Matlab interface
- .. and other things, have a look at the HTML documentation!
A library for handling vectors, tensors, and more.
VectTens is an object-oriented numerical library designed to manipulate vectors, tensors, and other mathematical quantities in a simple and efficient manner.