Search Results for "genetic algorithm software" - Page 3

Showing 114 open source projects for "genetic algorithm software"

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  • 1
    mergepbx

    mergepbx

    script for merging XCode project files in git

    Tracking a Xcode project in a version control system is annoying. Simply adding files can lead to merge conflicts that have to be solved manually, although it would be possible to resolve the conflict automatically if the merge algorithm would be aware of the structure of Xcode's project file. After long and annoying merge sessions in one of my projects, I came to the conclusion, that writing a merge driver for git which understands the structure of the project file would be a worthwhile...
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  • 2
    Morphix
    Morphix supports you in finding solutions in the product development. By using a morphological box and the NOA algorithm supports Morphix you by determining the best possible combination of individual product attributes.
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  • 3
    Scaffold_Builder

    Scaffold_Builder

    Combining de novo and reference-guided assembly with Scaffold_builder

    Scaffold_builder is software to order contigs generated by draft sequencing along a reference sequence. Gaps are filled with N's and small overlaps are aligned with Needleman–Wunsch algorithm and the consensus created with IUPAC codes. Scaffold_builder can help in the assembly and annotation of genomes by revealing what is missing and allowing targeted sequencing to close those gaps.
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  • 4
    Neural Libs

    Neural Libs

    Neural network library for developers

    This project includes the implementation of a neural network MLP, RBF, SOM and Hopfield networks in several popular programming languages. The project also includes examples of the use of neural networks as function approximation and time series prediction. Includes a special program makes it easy to test neural network based on training data and the optimization of the network.
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  • 5

    MITRE Common Layer 3

    Approach to choose MANET routing peers for existing protocols.

    ...This software is a prototype of the Common Layer 3 interface for two different mobility patterns on a mobile network using OLSR for MANET routing and OSPFv2 for IP routing. Draft RFC describing this interface in detail may be found at https://datatracker.ietf.org/doc/draft-shaio-manet-common-l3-interface/.
    Downloads: 0 This Week
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  • 6

    ThermV

    Comprehensive thermal analysis software package

    ThermV thermal analysis software package aims to provide the most sophisticated automatic analysis of thermal analysis data (TG/DTG, DTA and DSC). It offers new algorithm for concurrent peak deconvolution at different heating rates and provides full kinetic analysis of these data, including isoconversional methods for Ea, determination of reaction model and full kinetic triplet, Avrami coefficients, and dimensionality of crystal growth for reactions in the solid state. ...
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  • 7
    MRA

    MRA

    A general recommender system with basic models and MRA

    Multi-categorization Recommendation Adjusting (MRA) is to optimize the results of recommendation based on traditional(basic) recommendation models, through introducing objective category information and taking use of the feature that users always get the habits of preferring certain categories. Besides this, there are two advantages of this improved model: 1) it can be easily applied to any kind of existing recommendation models. And 2) a controller is set in this improved model to provide...
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  • 8

    PyVision Computer Vision Toolkit

    A Python computer vision library

    PyVision is a object-oriented Computer Vision Toolkit for researchers that contains vision and machine learning algorithms and algorithm analysis and easily interfaces with scipy/numpy, PIL, opencv and other computer and machine learning libraries.
    Downloads: 1 This Week
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  • 9

    ProximityForest

    Efficient Approximate Nearest Neighbors for General Metric Spaces

    A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. Draper, "Scalable Action Recognition with a Subspace Forest," IEEE Conference on Computer...
    Downloads: 0 This Week
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  • 10

    PyGAO

    Genetic Algorithm Optimization for Python

    A simple interface for performing genetic algorithm optimization for numerical problems. I am starting with a stripped-down version, where a solution can be described using a single vector of float numbers. Eventually, I will expand to more generic data structures and add multiple-species search options. For the time being, I have no plans of developing a GUI. For now, this is strictly a computational module.
    Downloads: 0 This Week
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  • 11

    Genetic data converter

    Convert genetic data for hapmixmap software

    Genetic data converter, for hapmap.org and hapmixmap data formats. Reads data in tabular format and writes in hapmixmap format. It's possible to add extensions to output different data formats.
    Downloads: 0 This Week
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  • 12

    Prime-Number-Finder

    Prime Number Finder usign Sieve of Eratosthenes

    Program by: Ravi Sharma (rvisharma) Prime-Number-Finder-using-Sieve-of-Eratosthenes =============================================== Finds Prime Numbers using Sieve of Eratosthenes Algorithm This Program gives you the prime number upto N Integers, Sieve of Eratosthenes Algorithm is used to determine the Prime Number To find the Prime Number, in the console Shell call the prime_finder(N) function, prime number will be given upto N integer. At first you will be prompted...
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  • 13
    Math tools in Python to tackle down problems in Operational Research fields. Comes with a Django based web interface to allow remote access to complex simulation means.
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  • 14
    Cerulean Hybrid Genome Assembler v0.1 Cerulean extends contigs assembled using short read datasets like Illumina paired-end reads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented with bacterial genomes in mind. I am not able to maintain and update the software due to change in research funding. However I will be happy to answer any queries or provide support and comments if you are interested in extending this algorithm. The method is fully described in Deshpande, V., Fung, E. D., Pham, S., & Bafna, V. (2013). Cerulean: A hybrid assembly using high throughput short and long reads. arXiv preprint arXiv:1307.7933. ...
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  • 15

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE.
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  • 16

    Game of Turmites

    Conway's Game of Life and Turmites Combined!

    ...It's all very randomly generated, and there is no way for any user input. I'll consider putting some in later. I had been wanting to make the Game of Life for some time as well as make some kind of genetic algorithm based code. So, here is what I came up with. While this may just seem like simplify a graphical display of what boredom looks like... well, it really doesn't go much past that point. If you Don't know what Conway's game of life is: It's the Black (Or white, I may have changed them) cells that follow a simple set of instructions based on the state of its adjacent cells. ...
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  • 17

    HPeak

    A HMM-based algorithm for defining enriched regions from ChIP-seq data

    HPeak is a hidden Markov model-based approach that can accurately pinpoint regions to where significantly more sequence reads map. Testing on real data shows that these regions are indeed highly enriched by the right protein binding sites. Command (single-end): perl /compbio/software/HPeak3/HPeak.pl -sp HUMAN/MOUSE -format BED -t TREATMENT.inp -c CONTROL.inp -n OUTPUTPREFIX -fmin 100 -fmax 300 -r 36 -ann -wig -seq -interfiles Command (pair-end): perl /compbio/software/HPeak3/HPeak.pl...
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  • 18

    Search Engine in python

    All student and developers are invited to join this web search engine

    This search engine project is created by a computer science student to challenge how search results are returned. Importance is placed on how web pages are ranked by a quick and efficient algorithm. All hands on deck is how we are calling this project. Algorithm design is really important and creative methods from better search results or web crawling is welcomed from all amateur programmers, students, web developers, software developers and computer science students from around the globe. We believe there's a better way to search, and that's why we are working on this project, why not join us.
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  • 19
    This project provides a set of Python tools for creating various kinds of neural networks, which can also be powered by genetic algorithms using grammatical evolution. MLP, backpropagation, recurrent, sparse, and skip-layer networks are supported.
    Downloads: 0 This Week
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  • 20
    Evolving Objects

    Evolving Objects

    This project have been merged within Paradiseo.

    See the new project page: https://nojhan.github.io/paradiseo/ (Archived project page: http://eodev.sourceforge.net/)
    Downloads: 4 This Week
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  • 21
    PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
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  • 22
    Open Metaheuristic (oMetah) is a library aimed at the conception and the rigourous testing of metaheuristics (i.e. genetic algorithms, simulated annealing, ...). The code design is separated in components : algorithms, problems and a test report generator
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  • 23
    RSAmake

    RSAmake

    An Cryptography software with RSA algorithm

    An Cryptography software with RSA algorithm RSAmake using Python and WxPython written
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  • 24
    DSS Student Toolbox
    DSS student toolbox is an interface created over the Direct Sequential Simulation algorithm created by A. Soares, 2001. It allows you to launch this simulation method using simple tools from a GUI. NOTE: this software development is deprecated. You can perform the same operations in our newest software GEOMS2 (beta release). You can download it here: https://sourceforge.net/projects/geoms2/
    Downloads: 0 This Week
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  • 25
    Free Resource Leveling Algorithm
    Free and easy to implement algorithm that can be used for resource leveling in Gantt projects. Uses resources assignment policies, availibility calendars, tasks\' priorities, dependencies, sizings, complexity due to human communication.
    Downloads: 0 This Week
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