Search Results for "linux terminal" - Page 19
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Showing 1491 open source projects for "linux terminal"
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FingerID
Metabolite identification via machine learning.
[NOTICE!] FingerID since version 1.4 will be hosted on github: https://github.com/icdishb/fingerid A metabolite identification software using tandem mass spectrometry and kernel methods. The related paper can be found at http://bioinformatics.oxfordjournals.org/content/early/2012/07/18/bioinformatics.bts437.abstract. Now it supports unix/linux like system. -
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Aqualid
General purpose build system
General purpose build tool. Key features: Flexible and scalable for large projects Dynamic dependency graph Batch build support Distributed build scripts (no fixed project structure) Support any build target types (files, strings, URLs, remote resources etc.) Conditional options Scons like build scripts (but don't compatible) -
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Hydroponic Automation Platform (HAPI)
Technologies for automating food production on various scales
The Hydroponic Automation Platform Initiative (HAPI) develops and provides hardware and software components for automating food production using hydroponic, aquaponics, and precision agriculture techniques. High-yield production in urban settings is one of the primary goals. Artifacts include hardware design (mainly Arduino-based), firmware, management software and reporting modules. -
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MDcons(Molecular Dynamics consensus)
Interpretation of Biomolecular MD simulations
MDcons is a tool to analyze conserved contacts during Molecular Dynamics (MD) simulations of Protein, Rna, Dna & Ligand based complexes. The input is either a Molecular Dynamics trajectory or a set of snapshots. The input can also be a single snapshot. The outputs are (1) map of most/less frequently conserved contacts during MD (2) a list of most/less frequently conserved contacts during MD. -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python and... -
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refracTag (discontinued)
Portable file-tagging utility coded in Python.
IMPORTANT: Refractag was later renamed to Inferact. Please use the latter for improved functionality. File-tagging for Windows and Linux. Terminal interface only, for now. -
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yarr-backup
rsync-based backup tool
Yet Another Rsync Rotator is a simple, rsync-based online backup tool, doing away with some of the existing tools' limitations that bug me most. It is usable but not feature-complete. Yarr! -
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PyMaster
D/s game
PyMaster is a virtual "master" or "mistress" program, facilitating a D/s game without the help of a partner. You take the role of the submissive. -
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LittleDarwin
Mutation Analysis Framework for Java
Mutation testing has been proven to be a reliable method to estimate the quality of a test suite. Most of current mutation tools require the architecture of their target system to be in a certain way in order to apply the technique; thus making it impossible to use them in complex build environments. LittleDarwin is a mutation testing tool designed primarily with the premise of easy deployment in complex systems; in order to provide mutation testing where other tools fail. -
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ASCII Scrabble
Scrabble game (English) for console, braille friendly
ASCII console-based Scrabble game. Simplified version of TuxWordSmith to run in XTerm, DOS or other console. Compatible with braille consoles. -
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Pugsly PubChem Client
Command-line, PubChem PUG client, written in Python
Client to the PubChem Tool (PCT), The Power User Gateway (PUG). Written in Python and developed for use with Linux. -
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Pyntrez NCBI Database Client
Command-line, Entrez, NCBI e-utilities client, written in Python
Comman-line client to Entrez, e-utilities, written in Python, developed for Linux -
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mitoMaker
mitoMaker - a mitochondria assembly and annotation script
mitoMaker is a pipeline script developed to simplify the assembly and automatic annotation of mitochondrial genomes, based on raw NGS reads and an optional target reference. mitoMaker calls well known assemblers and algorithms, such as SOAPdenovo, MIRA and blast+ and parses their results providing easily readable outputs, such as FASTA, GENBANK, SEQUIN, PNG and others. General pipeline: 1-iterative De Novo assembly, with different k-mer values, trying to assemble a build that matches... -
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Optimal BPM
The beat of your business
[See the files section for installation instructions] Optimal BPM™ is a project that aims to create an easy-to-use Business Process Management system (BPM) and tools. So far, only the tools, and only a data replication tool, Optimal Sync, has been released (available from the "files" page). But more is coming. It incorporates many different open source projects that relates to interoperability, transformation, context and process control. It has no business engine, instead it... -
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simplex with branch and bound
A tool for teaching simplex and branch & bound methods
This is a tool for teaching simplex and branch & bound methods. For simplex method, it comes with several examples including degeneracy and cycling, and allow the user to dictate how to pivot. For branch and bound method, it is desinged to interact with the user to explore all possible branch and bound trees. The user can also load a problem from a text file or simply type in a model directly. The format is very simple and very similar to the LP format, see the packed-in examples. -
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Cospace Dance
Robot for cospace dance
A complete set of code to build your own robot for cospace dance using: raspberry pi, arduino, xbee and blender, -
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Simple program for artificial neural network users. Right now the program can manipulate with Feed forward back propagation network.
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Lograptor
Command-Line search tool for syslog files
Lograptor is a search tool for system logs written in legacy BSD syslog format RFC 3164 and for IETF syslog protocol RFC 5424. The program can perform searches in syslog files like as the UNIX command "grep", but with the addition of some filters and parameters, useful to restrict the search field and retrieve the relevant informations from log files. You could specify parameters like hostname, application, date, time range, plus a set of filters on message data. -
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MusicPlayer
Music player - endlessly plays your music
This music player is supposed to be simple and all centered around an infinite intelligent queue (some other players call this PartyShuffle or DJ mode). You can manually add songs to it - but if you don't or the queue gets too short, it will automatically intelligently fill it with further songs. The intelligent queue decision currently is based on: * song ratings * context-based choices, e.g. related songs more likely Other features of this player: * open source, simplified BSD... -
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ReorJS
Distributed Computing with JavaScript
Create your own distributed computer that can distributed javascript based applications to any computer with a web browser, headless browser or node.js installation. For more information and updates please see our website - http://reorjs.com. -
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iFlux
Tornado Web Based Framework
iFlux was rebooted!!! We are developing a Tornado Web Based Framework. Still in planning phase. Check us on openhub too: https://www.openhub.net/p/iflux Used to be: PHP Framework project based on Model-View-Controller MVC Desing Patern. iFlux is a MyFuses extension that makes easy build applications with i18n, form mapping, template engine like smarty and other advanced features. -
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GGI stands for "General Graphics Interface", and it is a project that aims to develop a reliable, stable and fast graphics system that works everywhere. We want to allow any program using GGI to run on any platform requiring at most a recompile.
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Linux Maintainer
Updates and cleans up your computer with a simple GUI.
Updates and cleans up your computer with a simple GUI. No need to ever memorize terminal commands again! Currently is fully working on Arch Linux, and all Debian based distro's. Rpm based distro's are next on the list. Be sure to choose the right file for you distro... As a side note, I'm only in eighth grade so I have tons of time to work on this project, any feature suggestions would be greatly appreciated! -
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Latest on Arxiv
Parse the latest Arxiv RSS stream and get your institute preprints
Latest on Arxiv is a program/script with a simple job to do. Every day, it will download all pdf files from your favorite Arxiv RSS, and will then scan it to see if any authors from your favorite institute(s) are on there. If so, it will save the resulting index. The matched files are then parsed into a short list, featuring only the latest 4 preprints (which is ideal for a single TV screen in the coffee corner), and a long list which contains every paper in a clickable way. I provide...
