Showing 7 open source projects for "validate"

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  • 1
    Sync, Archive, Validate, Exchange (Save)
    Save is a lightweight framework for creating high availability systems based on Mon with extensions for authenticated heartbeats and IP address takeover. Save also provides validation, synchronization, and archival of configuration and other files.
    Downloads: 0 This Week
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  • 2

    miRPV

    miRPV: An automated pipeline for miRNA Prediction and Validation in si

    miRPV is an Automated tool that allows users to predict and validate microRNA from genome/gene sequence. System Requirement CPU: AMD64 (64bit) Memory: 2Gb RAM Storage: 5Gb Ubuntu 18.04
    Downloads: 0 This Week
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  • 3

    BisSNP

    Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller

    ...It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other bisulfite treated sequencing) to determine genotypes and methylation levels simultaneously. It works for both of single-end and paired-end reads.Specificity and sensitivity has been validate by Illumina IM SNP array. In default threshold 30X data (Phred scale score > 20), it could detect 92.21% heterozygous SNPs with 0.14% false positive rate Cytosine calling is not only based on reference context, so it could detect non-reference cytosine context. Google group for help: http://goo.gl/zL7Nj
    Downloads: 3 This Week
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  • 4

    BIRAP

    Bacterial Intergenic Region Analysis Pipeline

    BIRAP (Bacterial Intergenic Region Analysis Pipeline) is an open source, easy to use Perl pipeline that can be used to re-annotate bacterial genomes using experimental data. The tool integrates expression profile derived from RNA-seq and/or proteogenomics, compares it with existing in silico annotation and helps validate annotation, identify novel protein coding regions, putative non-coding RNA as well as help correct er-rors in the existing annotation. The pipeline requires “pileup” output from SAMtools for RNA-seq data and peptide/ePST locus file (GFF) from the Proteogenomic Mapping tool for prote-ogenomics data along with the genome and existing in silico annotation. ...
    Downloads: 0 This Week
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  • 5
    ReleaseWorks(R) is a suite of tools to help project teams control and automate the process of release management. Using a three stage process of Gather, Validate, and Publish, it provides a robust way of integrating user changes into the release.
    Downloads: 0 This Week
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  • 6
    This Perl module allows you to validate XML documents against a W3C XML Schema. This module does not implement the full W3C XML Schema recommendation, but a useful subset.
    Downloads: 1 This Week
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  • 7
    ES:: Modules are a collection of Packages written in Perl. They give to the spanish user an interface to validate things like DNI, CIF, Postal Codes, Regions, etc.
    Downloads: 0 This Week
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