Search Results for "linkage"

Mendel’s Accountant is a biologically realistic, forward-time, parallel, numerical simulation program which models genetic change within a population, as affected by mutation and selection.

CViT - Chromosome Viewing Tool. A collection of Perl scripts that enable quick visualizations of features on linkage groups, psuedochromosomes or cytogenetic maps. Intended for whole-genome views of data but can be used to create images of single chromosomes/linkage groups, contigs, or BACs, or even proteins -- any feature that has a location on a backbone. Handles most standard genetic/genomic coordinate systems. Reads GFF3 data and produces a PNG or SVG image.

HIVCD is an informatics tool developed to identify patient sequences that are too similar to happen by chance alone. Highly similar sequences are likely to occur from contamination or other situations like geographic linkage. Full details can be found in our paper titled "Application of a new informatics tool for contamination screening in the HIV sequencing laboratory" The code provided is a simple user interface to the underlying algorithm. We provide it as a convenience but it comes...

This script takes the Western Australian linked health data provided by the Data Linkage Unit and converts it to a TAB delimited format that is easier to import into SPSS or Excel etc. Mileage may vary.

HaploPainter - a pedigree and haplotypes drawing tool written in Perl/Tk. The software processes pedigree information in standard linkage formats combining haplotype information outputs from Simwalk, Genehunter, Allegro and Merlin.

http://genetik.charite.de/hoffmann/easyLINKAGE/index.html for most recent versions! easyLINKAGE is a GUI for automated setup/performance of linkage analyses/simulation programs (FastLink, SuperLink, SPLink, GeneHunter-/PLUS, Allegro, PedCheck, SimWalk).