Search Results for "genetic algorithm c"
Sort By:
Showing 30 open source projects for "genetic algorithm c"
View related business solutions-
Keep company data safe with Chrome EnterpriseMake AI work your way with Chrome Enterprise. Block unapproved sites and set custom data controls that align with your company's policies.
-
Gen AI apps are built with MongoDB AtlasMongoDB Atlas provides built-in vector search and a flexible document model so developers can build, scale, and run gen AI apps without stitching together multiple databases. From LLM integration to semantic search, Atlas simplifies your AI architecture—and it’s free to get started.
-
1
BD-Func
Bidirectional Functional Enrichment of Gene Expression Data
BD-Func is an algorithm to predict activation or inhibition of pathways based upon gene expression patterns. If you use BD-Func, please cite: Warden C, Kanaya N, Chen S, and Yuan Y-C. (2013) BD-Func: A Streamlined Algorithm for Predicting Activation and Inhibition of Pathways. peerJ, 1:e159 -
2
mapska
The Murder Accountability Project's Serial Killer Algorithm
Algorithm: Copyright (c) 2010, 2016 and 2017 - Murder Accountability Project. License: GNU General Public License (GPL) version 3. -
3
Base62 Encode/Decode Utility
A tool for encoding/decoding to base62
...the base62 program has been written to encode/decode files into this format. The syntax is similar to the popular base64 command line program. Inside the package there is a working c++ version of the base62 algorithm. the sources are inside the package. Note that from release 2.0.0 the algorithm is different from the one used before. If you have coded a file using base62 < 2.0.0 DO NOT USE base62 >= 2.0.0 to decode it. The 2.0.1 release has a new algorithm for chew, we have a compat flag -
4
Flip card learning program for iPhone with a spaced learning algorithm. Create your own databases and edit the cards directly on the iPhone. Import Palm databases or csv-formatted files and backup your data with our Java application.
-
BoldTrail Real Estate CRMBoldTrail, the #1 rated real estate platform, is built to power your entire brokerage with next-generation technology your agents will use and love. Showcase your unique brand with customizable websites for your company, offices, and every agent. Maximize lead capture with a modern, portal-like consumer search experience and intelligent behavior tracking. Hyper-local area pages, home valuation pages and options for rich lifestyle data keep customers searching with your brokerage as the local experts. The most robust lead gen tools on the market help your brokerage, teams & agents effectively drive new business - no matter their budget. Empower your agents to generate free leads instantly with our simple to use landing pages & IDX squeeze pages. Drive more leads with higher quality and lower cost through in-house tools built within the platform. Diversify lead sources with our automated social media posting, integrated Google and Facebook advertising, custom text codes and more.
-
5
MaxBin
An automatic tool for binning metagenomics sequences
MaxBin is a software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users could understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic sequences and the reads coverage information or sequencing reads. For users' convenience MaxBin will report genome-related statistics, including estimated completeness, GC content and genome size in the binning summary page. Users could use MEGAN or... -
6
scalpel
Genetic variants discovery tool
Bioinformatics pipeline for discovery of genetic variants from NGS reads. -
7
MicroGP
A multi-purpose extensible self-adaptive evolutionary algorithm
MicroGP (µGP, ugp) is a versatile optimizer able to outperform both human experts and conventional heuristics in finding the optimal solution of hard problems. It is an evolutionary algorithm since it mimics some principles of the Neo-Darwinian paradigm. ⚠️ A new version is available on https://github.com/squillero/microgp4 -
8
iCAS - An Illumina Clone Assembly System
An Illumina clone assembly system using SOAPdenovo and ABySS
Clone-by-clone sequencing, as a means of achieving high quality assemblies for large and complex genomes, continues to be of great relevance in the era of high throughput sequencing. However, assemblies obtained using current whole genome assemblers are often fragmented and sometimes have issues of genome completeness owing to different data characteristics introduced by multiplexed sequencing. With iCAS the data filtering process is based on a novel kmer frequency algorithm, resulting... -
9
GGNFS is an open source implementation of General Number Field Sieve algorithm for factoring integers.
-
Smart Business Texting that Generates PipelineTextUs is the leading text messaging service provider for businesses that want to engage in real-time conversations with customers, leads, employees and candidates. Text messaging is one of the most engaging ways to communicate with customers, candidates, employees and leads. 1:1, two-way messaging encourages response and engagement. Text messages help teams get 10x the response rate over phone and email. Business text messaging has become a more viable form of communication than traditional mediums. The TextUs user experience is intentionally designed to resemble the familiar SMS inbox, allowing users to easily manage contacts, conversations, and campaigns. Work right from your desktop with the TextUs web app or use the Chrome extension alongside your ATS or CRM. Leverage the mobile app for on-the-go sending and responding.
-
10
A set of tools for working with VCF files, such as those generated by the 1000 Genomes Project. This project is migrating to github: https://vcftools.github.io/
-
11
Use of Michael Rabin's Information Dispersal Algorithm to provide secure, dispersed storage in a networked environment. For full download, please get both Math-FastGF2 and Crypt-IDA releases under the files link. See project wiki for more information.
-
12
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.
-
13
HRSS
Hybrid Relative Specificity Similarity based on Gene Ontology
This software provides a hybrid GO-based semantic similarity algorithm for evaluating the functional similarity between GO terms or gene products. The software uses the pre-downloaded GO database files and the GO annotation files. It allows the users to set organisms, and evidence codes ignored. The software is composed of five modules, getGODAG, getGOAnno, hrssmatrix, hrsstps and hrsspps. -
14
Featurama is a library that implements various sequence-labeling algorithms. Currently Michael Collins' averaged perceptron algorithm is fully implemented.
-
15
hrefinder
Detection of homologous recombination events from SNP data
This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of... -
16
HPeak
A HMM-based algorithm for defining enriched regions from ChIP-seq data
HPeak is a hidden Markov model-based approach that can accurately pinpoint regions to where significantly more sequence reads map. Testing on real data shows that these regions are indeed highly enriched by the right protein binding sites. Command (single-end): perl /compbio/software/HPeak3/HPeak.pl -sp HUMAN/MOUSE -format BED -t TREATMENT.inp -c CONTROL.inp -n OUTPUTPREFIX -fmin 100 -fmax 300 -r 36 -ann -wig -seq -interfiles Command (pair-end): perl /compbio/software/HPeak3/HPeak.pl... -
17
Simple Fast Dictionary
Simple, small and fast dictionary lib on C
The library does quick search of dictionary words in arbitrary input strings. Known problems are known. :) See appropriate section in documentation. Also, only ASCII words and strings for now. -
18
breve is a free, open-source 3D multi-agent simulation package designed for simulating decentralized systems and artificial life.
-
19
-
20
A novel algorithm to layout the contigs with more than one reference genomes at a time using global searches
-
21
Basic implementation of K-nearest neighbour Algorithm and the application of KNN to classify protein sequences as transmembrane beta barrel or non-transmembrane beta barrel on the basis of whole sequence amino acid composition given as input.
-
22
vuVolume is a framework for volume rendering algorithms in C++. When creating a new rendering method in vuVolume it is possible to just concentrate on the actual algorithm and let the framework take care of the more administrative tasks.
-
23
Genetic programming environment to inference context free grammars base on positive and negative examples of language.
-
24
PAM_PKA is a a PAM authentication module, enabling the use of cheap removable media for token authentication. PAM_PKA uses the DSA algorithm to perform public key authentication to verify the identity of the user requesting access rights.
-
25
Genetic analysis programs for affected sibling pair data and discrete traits, including multipoint exclusion mapping, map distance estimation, transmission disequilibrium testing, and relationship validation
