Search Results for "cortex-m"
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Showing 27 open source projects for "cortex-m"
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FTP prune
FTPprune is a Perl script to manage a remote ftp archive
FTPprune is a Perl script to manage the size of a remote ftp archive. It was originally developed to manage offsite copies of Zoneminder CCTV events, but can be used with any FTP file archive. FTPprune will go through the archive and remove the oldest files reducing the archive size to a maximum that you specify, optionally preserving the last (-a) days of files. There are a few other options too - see the wiki for command line usage and Perl modules required. -
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Broadcom-bt-firmware
Repository for various Broadcom Bluetooth firmware
broadcom-bt-firmware provides the firmware blobs needed by Linux to initialize Broadcom Bluetooth adapters found in many laptops and mini-PCIe/M.2 modules. On these devices, the kernel driver expects a small firmware image to be loaded at runtime before the controller becomes fully functional. The project aggregates known-working .hcd files, often extracted from vendor Windows drivers, and organizes them by chipset and device ID so users can match hardware quickly. Clear mapping tables and directory structure help distributions and end users package the correct files under /lib/firmware/, which resolves the common “Bluetooth not found” issue after installing Linux. ... -
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Integrator
Integrates proteomic searches from multiple search engines
...For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/integrator/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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OmssaGUI
GUI front-end for OMSSA
...For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/omssagui/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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SequestGUI
GUI front-end to sequest.exe
...For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/sequestgui/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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FastaTools
Performs several operations to Fasta protein databases
...For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/fastatools/code/ci/default/tree/README.md Or you can download the Documentation an Tutorial PDF file in the Files section: https://sourceforge.net/projects/fastatools.lp-csic-uab.p/files/FastaTools%20Documentation%20and%20Tutorials.pdf - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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MetaErg
Metagenome Annotation Pipeline
MetaErg is a stand-alone and fully automated metagenome and metaproteome annotation pipeline published at: https://www.frontiersin.org/articles/10.3389/fgene.2019.00999/full. If you are using this pipeline for your work, please cite: Dong X and Strous M (2019) An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs. Front. Genet. 10:999. doi: 10.3389/fgene.2019.00999 The instructions on configuring and running the MetaErg pipeline is available at GitHub repository: https://github.com/xiaoli-dong/metaerg -
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pfm is a curses-based file manager in Perl. PLEASE NOTE: this project has moved to github. Find the latest version at: https://github.com/ruittenb/p-f-m
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Kinannote
Protein Kinase Identification and Classification
...Kinannote runs on a unix command line and depends on local hmmer 2 and Blast 2.24 installations. Citing Kinannote: Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily Jonathan M. Goldberg; Allison Griggs; Janet L. Smith; Brian Haas; Jennifer Wortman; Qiandong Zeng Bioinformatics 2013; doi: 10.1093/bioinformatics/btt419 http: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full pdf: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full.pdf+html -
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Placnet
Placnet project
...The input of placnet is a set of contigs and one or more SAM files with the mapping of the reads against the contigs. Placnet obtains a set of files, easily opened on Cytoscape software or other network tools. Please cite PLACNET as: Lanza VF, de Toro M, Garcillán-Barcia MP, Mora A, Blanco J, Coque TM, de la Cruz F: Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from Whole Genome Sequences. PLoS Genet 2014, 10:e1004766. -
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...Data will then be uploaded via a wireless radio MESH network(868 Mhz) to a database server for later analyze. The Prototype is developed on two microcontrollers(AVR and ARM Cortex-A8) with the low power and
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CIMS
Crosslinking induced mutation site analysis
This package includes the scripts to detect statistically reproducible crosslinking induced mutation sites (CIMS) and cross linking induced truncation sites (CITS) from HITS-CLIP data. References: Moore, M.*, Zhang, C.*, Gantman, E.C., Mele, A., Darnell, J.C., Darnell, R.B. 2014. Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis. Nat Protocols, 9:263-293. Zhang,C.†, Darnell, R.B.† 2011. Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data. ... -
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...MGEScan-non-LTR is a software for the identification of non-LTR retrotransposons in genomic sequences, following a computational approach inspired by a generalized hidden Markov model (GHMM). References: 1. M. Rho et al., "De novo identification of LTR retrotransposons in eukaryotic genomes", BMC Genomics (2007) 8:90. 2. M. Rho and H. Tang, "MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes", Nucleic Acids Research (2009) 37:21.
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macls
Perl ls-like command shows mtime, atime, ctime for Linux
Pure Perl script that has the sole purpose of grabbing the atime, mtime, and ctime of a file or a bunch of files and outputting the results. M-A-C ls (macls) -
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TBARMapper
Finds mutations of M. tuberculosis
It maps sequencing reads with MTB reference genome (H37Rv) using NCBI blast, and finds out mutation sites. -
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RAPD Primer Design from Metagenomes (RPD-M) scans metagenome sequences identifying and determining relative frequency of candidate primers for Random Amplification of Polymorphic DNA (RAPD) assays.
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"cry"pted "st"orage - "e"ncrypted "m"edia 'Command line application written in perl to provide encrypted diskspace on mobile storage devices and allow management of such encrypted storage.
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serverM is an extremely flexible signature-based host-based intrusion detection system (HIDS). Running as a Perl daemon, it uses little CPU, and is capable of detecting a wide range of intrusions. Signature language is powerful and alarm options varied.
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KjSslSocket is library for client server network communication via openSSL. Including client server examples, where the server communicating with a lot of clients. Now including perl server example. In the future I`m going to write QT interface for this
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Implementation of web library catalog (sometimes caled OPAC) based on SWISH-E and perl. It uses OpenIsis for CDS/ISIS files, http feed for web listings, MARC files and other structured sources like M$ Excel files. Uses flexibile XML config files.
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relax is a linux daemon which uses the speedstepping technology of Intel Pentium-M processors to reduce power consumption and hence increase the operation time of your laptop before having to recharge the battery
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Through collaberative efforts I hope to make available an opensource multiplatform, mutiformat, web presentation producer in the same vein as MS Producer, softTV Presentation maker, Macromedia Breeze, etc. It`s a big task & I`m going to need your help!
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Gilland Forum Software is your best solution to bringing your website community together. GFS is fully featured, including user registration, profiles, searching, deleting and editing posts, user deactivation, header and footer support, and much, much m
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webstats is a front/backend for report magic and analog. it helps managing the statistics created by analog and report magic for multiple virtual domains hosted on one server. set up properly it creates automagically analog and report magic reports
