Showing 12 open source projects for "compute"

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  • 1
    thinkpad-ec

    thinkpad-ec

    Infrastructure for examining and patching Thinkpad embedded controller

    thinkpad-ec is a community effort to study and patch the embedded controller (EC) firmware used in certain classic Lenovo ThinkPad models. The EC is a tiny microcontroller that governs low-level features such as keyboard scan codes, fan behavior, battery checks, and thermal policies—things the operating system can’t normally change. This project documents the EC’s layout and provides tooling to extract, analyze, and modify EC images so users can apply specific fixes or enhancements. Common...
    Downloads: 1 This Week
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  • 2
    cloc (Count Lines Of Code) counts, and computes differences of, comment lines, blank lines, and physical lines of source code in many programming languages. cloc is now being developed at https://github.com/AlDanial/cloc
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    Downloads: 58 This Week
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  • 3

    openSEQ

    NGS compute distro proloaded with pipeline analysis software

    Forked Ubuntu 14.04 minimal install with XOrg and FluxBox desktop environment for web-based pipeline construction and job submission. HOWTO: 1) Set VM network settings to a bridged adapter type. 2) Load VM to client 3) From host: $ ssh -X ubuntu@<foobar> 'firefox && butterfly.server.py --unsecure' --- passwd = 616287xx 5) or ssh into host with X forwarding, and type runme This will launch an X-session of Firefox on the client, which will then be forwarded to the host. The...
    Downloads: 0 This Week
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  • 4
    Cbench is intended as a relatively straightforward toolbox of tests, benchmarks, applications, utilities, and framework to hold them together with the goal to facilitate scalable testing, benchmarking, and analysis of a Linux parallel compute cluster.
    Downloads: 3 This Week
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  • 5
    ParaSim

    ParaSim

    Parallelized calculation of molecular similarities

    ...As as special feature, ParaSim allows to store and and to access frequently queried datasets as persistant objects in memory for short response times. ParaSim calculates chemical similarities based on binary structural fingerprints. It does not compute fingerprints by itself but relies on third party software to do so. Basically, all types of structural fingerprints which can be stored in an array of bits (a bitset) can be used by ParaSim. See the Wiki (https://sourceforge.net/p/parasim/wiki/Documentation/) for detailed documentation. FEEDBACK HIGHLY APPRECIATED!
    Downloads: 0 This Week
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  • 6
    A portal project to produce a web based front end to a compute resource, such as a cluster, using PHP, mysql, apache and perl. The intent is to allow non-programmers to use complex programs through an intuitive web interface.
    Downloads: 0 This Week
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  • 7
    ...Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g., proportion of character/numeric values, min/mean/median/max, missing values, correlation with a target column). * tbljoin: Relational join without the need of pre-sorting and column matching. * ... ...
    Downloads: 0 This Week
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  • 8
    CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
    Downloads: 0 This Week
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  • 9
    BogoSec is a utility that calculates source code security quality metrics. A flexible framework interprets the results of existing scanners to compute these metrics. BogoSec is useful to track security quality across releases and competing packages.
    Downloads: 0 This Week
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  • 10
    Cbench is intended to be a relatively straightforward collection of tests, benchmarks, applications, utilities, and framework to hold them together with the goal to facilitate scalable testing and benchmarking of a Linux parallel compute cluster.
    Downloads: 0 This Week
    Last Update:
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  • 11
    Designed to allow quick setup of powerful NOW-based clusters to run compute-intensive applications. Applications do not have to be designed specially for these clusters to benefit.
    Downloads: 1 This Week
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  • 12
    BioSap-Blast Integrated Oligonucleotide Selection Accelerator Package. BioSap selects unique oligos for microarrays by detecting user-defined parameters and running parallel instances of Featurama and Blast on compute engines, producing xml output files.
    Downloads: 0 This Week
    Last Update:
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