Search Results for "abc-map"
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Showing 64 open source projects for "abc-map"
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Secure remote access solution to your private network, in the cloud or on-prem.OpenVPN is here to bring simple, flexible, and cost-effective secure remote access to companies of all sizes, regardless of where their resources are located.
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SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
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Netdisco
Full-featured enterprise network management tool
Netdisco is an SNMP-based L2/L3 network management tool designed for moderate to large networks. Routers and switches are polled to log IP and MAC addresses and map them to switch ports. Automatic L2 network topology discovery, display, and inventory. -
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bbbike
An information system for cyclists in Berlin and Brandenburg
A bike information system for cyclists in Berlin and Brandenburg (Germany) with a map view and a routing engine. There's a graphical interface (based on Perl/Tk) as well as an Web interface. Source code may be found at Github: https://github.com/eserte/bbbike/ -
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CSI-EXPLOREFS
Tools Explore the List of Files based Mount
* Introduction: - The ExploreFS is a tools based Perl code. - The tools was created to make one list of entries inside one filesystem Unix or Windows Volumes. - The list can be used to map the state of usage, inventory, extract ranges of lists based dates, propose a list of duplicate files for analysis or removal. - The options and results can be mapped looking the online help. See "ExploreFS --help" and "ExploreDiff --help" * Support: The Support Service is FREE. Do you need... -
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New Debian package available 30th April 2021, lots of bugs corrected. Simple system for displaying civic features, opportunities and problems on a rasterised map. Currently to map 'informal gardening' and foraging for useful items on the street. Simple to set up and use. Can be parametrised for specific usage. Installation description, to be expanded in: https://sourceforge.net/p/datamap/wiki/Installation/
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smsmap
Simple reporting system SMS to sqlite3 and web clustering display
Designed as quick coronavirus infrastructure for feature phones and simple non-app users. One can use it as self-isolation notification, requests for help (both therefore map clustered) etc. The 0.9-4 version will now work with a local SIM card and gammu-smsd, no need for an SMS supplier. There's a demo with a UK number, contact me, if you want to try it out. Also since it's Perl one can add a great deal of sophisticated message parsing on the application side. It'll run comfortably on a old... -
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bspipe
An End-to-End Analysis Pipeline for BS-seq
... for visualization, and (9) support for advanced sequencing technologies such as TAB-seq, OxBS-seq, MAP-it, and NOMe-seq. -
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BisSNP
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other... -
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OPTOSS NG-NetMS
OPTOSS Next Gen Network Management System (NG-NetMS)
Why to pay tens of thousands $$$ for your network management software? Get visibility into your networks and complex processes inside with NG-NetMS now! NG-NetMS is a new end-to-end network management platform for your Linux servers, Cisco, Juniper, HP and Extreme routers, switches and firewalls. NG-NetMS is precise, quick and efficient. It collects most complete information about the network inventory, topology, map of IPv4 addresses quickly and with minimum hassle. Most important... -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
.... MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples. -
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XASTIR
Multiplatform Ham Radio APRS and Mapping Program
NOTE: Code commits are FROZEN on SourceForge: New code is now at <http://github.com/Xastir/Xastir>. Real-time tracking & messaging of stations via radio/internet APRS data streams, w/125 map formats supported. Linux/FreeBSD/Solaris/MacOSX/Windows in any of 7 languages. Can also be used for mobile mapping w/GPS. MAILING LISTS ARE AT: PROJECT->WEB SITE. -
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Wireless Universal Resource File
Handset Detection for Mobile Applications. Device Description Database
WURFL lets you detect thousands of types of mobile devices accessing your web service and take decisions based on what that device can or cannot do. With WURFL, you can optimize mobile web content, effectively deliver advertisements, or analyze mobile traffic. WURFL will read HTTP requests from mobile browsers and search the Device Description Repository (DDR) for the corresponding device properties (i.e. capabilities). WURFL will return the device capabilities to your application, which... -
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Automalator
State Dependency deconstructor and mapper for C source code.
Flowcharts not telling you what you want to know about some C source code? Try a State Dependency map! Every C source file is an implemention of a state machine. Implicit in the definition of a state machine is a network of dependencies between the states. The Automalator * deconstructs the C code into the core state machine * collates the transactions into the dependency net * generates a diagram-format file with the states and dependencies as the nodes and edges. Pre... -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting... -
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Gpsdrive is a car (bike, ship, plane) navigation system. Displaying your position on a map and a lot of other functions are implemented. It works with vector maps from http://www.OpenStreetMap.de/
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msBayes allows complex and flexible phylogeographic inference. More specifically, you can test the simultaneous divergence (TSD) of multiple population (species) pairs. It uses approximate Bayesian computation (ABC) under a hierarchical model.
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HPeak
A HMM-based algorithm for defining enriched regions from ChIP-seq data
HPeak is a hidden Markov model-based approach that can accurately pinpoint regions to where significantly more sequence reads map. Testing on real data shows that these regions are indeed highly enriched by the right protein binding sites. Command (single-end): perl /compbio/software/HPeak3/HPeak.pl -sp HUMAN/MOUSE -format BED -t TREATMENT.inp -c CONTROL.inp -n OUTPUTPREFIX -fmin 100 -fmax 300 -r 36 -ann -wig -seq -interfiles Command (pair-end): perl /compbio/software/HPeak3/HPeak.pl -sp... -
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Ozitools project aims to collect/create a set of tools for OziExplorer map processing and convertion to/from open formats (e.g. GeoTiff) appropriate for using in GIS applications.
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This module provides functions for calculating the path to a map tile at OpenStreetMap out of geographic coordinates.
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A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g...
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yp2ldap
NIS-to-LDAP translation tools
Replacement versions of ypwhich, ypcat and ypmatch that simulate the original NIS commands but obtain their data from LDAP entries defined with the RFC2307 schema. -
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clessidera
A simple archive system for emails
The idea is to build an email archive system for lazy people ... like me ;-). At first you can move messages by date in a dedicated mailbox on-line. Or archive messages in compressed format to be stored somewhere. The compressed archive is indexed to be searchable and recoverable if needed. This project is in early stages of development (near 1.0 in the road map). See FEATURES for details and version road map. It works with an IMAP server, and it has been tested on Linux Slackware 13.0 32 bit... -
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check_multi is a Nagios wrapper plugin. It drastically increases Nagios performance and provides a independent configuration interface. New feature: Process Views can map and illustrate complex circumstances
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GibGameStat Currently handles Data from Battlefield 1942. It uses MySql, XML and PERL to read the log files,store the data and generate html pages with the information. Sorted by Date, Map and User.
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Cscape is an application for visualizing and navigating through data from a Reverse Phase Protein Microarray (RPMA). Cscape uses the Google Maps API to map the RPMA data on top of an image of a cancer cell and its associated pathways.