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Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.
LDIFF is an enhanced language-independent line differencing tool built upon the Unix diff and overcomes its limitations in determining whether an artifact line has been changed or is the result of additions and removals
This project contains sourcecode and user-readable documents for Mark Abraham's bridge bidding systems. It includes symmetric relay systems and standard variants featuring transfer-oriented responses to natural opening bids.
EPIC is an open source Perl IDE for the Eclipse platform. Features supported are syntax highlighting, on the fly syntax check, content assist, perldoc support, source formatter, templating support, regular expression plugin and a Perl debugger.
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VisualCamel is a WYSIWYG Graphical Perl/Tk GUI creator. VisualCamel is an attempt to create a Perl/Tk GUI editor that resembles Microsoft's Visual Basic.
This SourceForge page is no longer maintained. To find downloads, sourcecode, or documentation for the PostgreSQL project, please see our home page: http://www.postgresql.org.
Continues Integration system which has been developed for distributed networking execution environment. It started its life serving builds and tests in a commercial environment early days well before continues integration became a standard well-applied best practice in the industry. The code was open-sourced and was used by multiple local development teams known to the author. Later on alternative CI systems, like Jenkins and BuildBot, gained popularity, established big communities and evolved...
This project is abandoned. Download these files at your own risk.
For the latest version please visit http://decafbad.net/projects/piddlepodder/
This application is a podcatching client written in Perl. It is based off of the simplicity of bashpodder with a few added features. It downloads podcasts from a list of XML feeds, and puts them into a download directory by date.
A collection of open-source build and release tools, useful for creating and configuring software development, release, and QA production infrastructures.
No-Nonsense Code-to-Cloud Security for Devs | Aikido
Connect your GitHub, GitLab, Bitbucket, or Azure DevOps account to start scanning your repos for free.
Aikido provides a unified security platform for developers, combining 12 powerful scans like SAST, DAST, and CSPM. AI-driven AutoFix and AutoTriage streamline vulnerability management, while runtime protection blocks attacks.
diff utility won't generate good summary report for comparison, that is not good for sourcecode comparison. In Windows, BeyondCompare could do it very well, the goal of this project is to build a similar utility with Beyond Compare in Perl.
BTG Web Search Engine is developed for students or developers who are interested in search engine technology. The engine web will be written in C++, Java, Perl,and Python. At the beginning of the project, a simple search engine design will be used.
BASE is the Basic Analysis and Security Engine. It is based on the code from the Analysis Console for Intrusion Databases (ACID) project. This application provides a web front-end to query and analyze the alerts coming from a SNORT IDS system.
OpenBrain is an AIML interpreter/terminal hybrid. It's intended use right now is sort of a desktop assistant, designed to speak in your language instead of system shell code. The Project is still being developed so it isn't that intelligent quite yet.
XBSDB is the tool to operate with data in JavaScript code like with SQL-data. XBSDB stores, arranges and selects data in your scripts. You can insert, delete, update and select records, you can use indexes. JSON-based methods allow data exchange.
The latest version of genxface is included in the *mak* project, which is hosted on *github*. Genxface is a simple tool to parse C files and generate interface files. In the first version, it generates prototypes. It is intended to generate mock wrap
DEPRECATED PROJECT! SolexaTools is becoming the SeqWare project (http://seqware.sourceforge.net) to better reflect its expanded sequencer support. Please go to this project page for code and documentation.
This piece of code uses Perl and qx// calls to OpenSSL and to other small Perl scripts, to follow the RFC-4130. At 2009-09-09, the project works fine with encrypted, signed, binary and base64 . Read the README file inside the tar.gz for details
DKU is an embedded parallel language, or "piggy-back" language that uses function calls to invoke the language's execution model. It tunes task-size to the hardware while hiding hardware details for high performance portability of parallel code.
Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.
This tool is an dependency management focused on sw-dev. It tracks source-code from software, and checks the object-dependencies and relations. The differences in two snapshots can show the need for further implementation- or testing-acitvities.
DNA sequencing quality values, base calling and trace processing
Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions...
hxRender is a 2D graphics library built around OpenGL for rendering, and may be used with SDL for window setup. It was designed in mind to replace SDL's antiquated rendering methods.