Showing 14 open source projects for "python database"

View related business solutions
  • Our Free Plans just got better! | Auth0 Icon
    Our Free Plans just got better! | Auth0

    With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

    You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.
    Try free now
  • Free and Open Source HR Software Icon
    Free and Open Source HR Software

    OrangeHRM provides a world-class HRIS experience and offers everything you and your team need to be that HR hero you know that you are.

    Give your HR team the tools they need to streamline administrative tasks, support employees, and make informed decisions with the OrangeHRM free and open source HR software.
    Learn More
  • 1
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
    Leader badge
    Downloads: 24 This Week
    Last Update:
    See Project
  • 2
    multiplierz
    Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
    Downloads: 1 This Week
    Last Update:
    See Project
  • 3

    UniPyRange

    Tool to fetch protein/DNA truncation constructs from Uniprot DB

    Very simple python script which saves you the pains of counting the amino acids/DNA bases in fasta files from the Uniprot and NCBI RefSeq Database (1, 2). Lets say you want the amino acid sequence of range 128-387 from a 1000 amino acid protein - this script will help you to avoid counting mistakes by just showing you the specified sequence in amino acids and coding DNA base pairs (ideal for amplification primer design) of a specified Uniprot ID
    Downloads: 0 This Week
    Last Update:
    See Project
  • 4
    Protospacer

    Protospacer

    Rapid gRNA design and validation for CRISPR

    Sign up to our mailing list at http://www.protospacer.com/contact.html. Protospacer allows researchers to build, analyze, and share their own database of CRISPR target-sites. This enables the development of custom libraries and helps to transfer the CRISPR technology to new organisms. Each Protospacer database is a simple catalogue of all possible Cas9 target-sites within a given FASTA sequence, i.e. all NGG/NAG sites. Protospacer then allows the user to sub-select targets from the...
    Downloads: 0 This Week
    Last Update:
    See Project
  • Looking for a super simple, fully customizable, easy to manage intranet, that comes packed with powerful features all for from $85 USD per month including unlimited users and unlimited storage? Icon
    Looking for a super simple, fully customizable, easy to manage intranet, that comes packed with powerful features all for from $85 USD per month including unlimited users and unlimited storage?

    Intranet software that is simple to setup and easy to use

    MyHub is a revolutionary cloud-based intranet solution that provides business various manuals and tools to streamline workflow. Built to be mobile, MyHub offers users the ability to connect and collaborate with entire teams or just a couple of members. With a combo of in-app options to have email, social media, and the tools needed to be efficient, projects move smoother through any processes you design. Admins can give their users the ability to Manage Content, a Discussion Board, File-Cloud-Sharing, and more.
    Learn More
  • 5
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the...
    Downloads: 0 This Week
    Last Update:
    See Project
  • 6
    Quantum Chemistry Import Tool is a django application that parses the output file of quantum chemistry software as NWChem, Octopus, Gaussian, etc. The result can be saved in relational database.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 7

    u/sbmv2012

    Taxonomy assignment of metazoans using a python based pipeline

    The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 8

    Primer Design Tool

    Design PCR primers

    A simple tool to design DNA primers for mutagenesis in BGME lab (JHU). Allows users to select or enter background sequence and add current and new mutations. During the design process, users are presented with various updating checks to guide them.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 9
    A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file.
    Downloads: 0 This Week
    Last Update:
    See Project
  • Use the Filerev app to organize Google Drive and reduce storage costs. Icon
    Use the Filerev app to organize Google Drive and reduce storage costs.

    Find and Remove Duplicates, Organize Effectively, and Manage Storage Smartly.

    Use the Filerev app to organize Google Drive and reduce storage costs. The Duplicate File Finder quickly shows all duplicates in Google Drive without downloading all of your files. The Storage Analyzer lets you browse your folders by size in Google Drive. You can also view your Google Drive files in different categories such as: hidden / orphaned files, large files, empty files, empty folders, large folders, old files, temporary files, files by extension. Every category includes powerful filters and the ability to bulk delete your files in Google Drive. Plus, there are charts and graphs to help you quickly see how your storage space is being used and the number of files and specific types of files or folders that are consuming the most space. You can get started for free to see what is consuming your Google Drive storage space and quickly clean up the clutter.
    Learn More
  • 10
    The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 11
    This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 12
    DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
    Downloads: 0 This Week
    Last Update:
    See Project
  • 13
    Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
    Downloads: 0 This Week
    Last Update:
    See Project
  • 14
    openSputnik is a robust distributed platform for massive scale precalculation of genetic and genomic data using contemporary bioinformatics methods. Annotated DNA, RNA and protein sequences are stored as binary objects in a variery of relational database
    Downloads: 0 This Week
    Last Update:
    See Project
  • Previous
  • You're on page 1
  • Next