A new, fast implementation of algorithms used for the adaptive analysis of amino acid alphabets as described in
Philip, G. K., & Freeland, S. J. (2011). Did evolution select a nonrandom “alphabet” of amino acids? Astrobiology, 11(3), 235-240.
Ilardo, M., Meringer, M., Freeland, S., Rasulev, B., & Cleaves II, H. J. (2015). Extraordinarily adaptive properties of the genetically encoded amino acids. Scientific reports, 5, 9414.
Ilardo, M., Bose, R., Meringer, M., Rasulev, B...