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Processing and analysis of Small Angle X-ray Scattering (SAXS) data.
...It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis (EFA) or the regularized alternating least squares (REGALS) methods.
Active source code is now maintained on github:
https://github.com/jbhopkins/bioxtasraw
To install:
Check the instructions available at: http://bioxtas-raw.readthedocs.io/en/latest/install.html and in the Files tab.
User guides:
RAW guides are available at: http://bioxtas-raw.readthedocs.io/ and in the Files tab.
To contact us, see:
https://bioxtas-raw.readthedocs.io/en/latest/help.html
Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats.
For a copy of the source code, check out our Github repositories:
mzDesktop: https://github.com/MaxAlex/mzDesktop
multiplierz: https://github.com/MaxAlex/multiplierz
Stochastic simulator for signaling pathways occuring in biological cells. Handles reaction-diffusion processes in 3D tetrahedral meshes.
Please check our new repository: https://github.com/CNS-OIST/STEPS
[OBSOLETE, check Github repository: https://github.com/LBT-CNRS/MDDriver)
MDDriver is a library allowing a user to easily couple molecular visualisation tools with simulation code through a network. It allows to carry out interactive molecular dynamics, visualize simulation results and drive a simulation in interactive time.
RawGeno Version 2.0-1 is released! RawGeno is an R CRAN library automating the scoring of AFLP electropherograms.
The library includes a graphical user interface to simplify its use.
Note that the 2.0-1 version is delivered as a source (*.tar.gz for Linux and Mac users) and as a binary file (*.zip, for Windows users). The installation procedure differs slightly according to your system; but this should remain simple. Have a look at the readme file when you download your new copy...