Open Source Python Medical Software - Page 2

An input GUI for parameterizing simulation with the LSD Simulator

SDF Merger is a Python-based desktop application designed for chemists and researchers working with molecular data. The tool provides an graphical interface to merge multiple SDF files containing chemical structures and properties into a single consolidated file. Key Features: 1. User-Friendly GUI: Clean, professional interface with corporate branding 2. Batch Processing: Automatically finds and merges all SDF files in a selected folder 3. Real-time Progress Tracking: Visual progress bar and status updates during merging Technical Specifications: 1. Language: Python 3 2. GUI Framework: Tkinter 3. Chemistry Library: RDKit for chemical data processing 4. File Formats: Input/Output in SDF format Citation Md. Ismiel Hossen, A. (2026). SDF Merger: A Desktop and Web Tool for Merging Chemical Structure Data Files (v1.1). Zenodo. https://doi.org/10.5281/zenodo.18291398

This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.

The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.

The 3D Slicer is freely available, open-source software for visualization, registration, segmentation, and quantification of medical image data. Follow the link for more info: http://slicer.org

ABE is a small, fast and convenient program for visualizing and modeling experimental bioassay data. The data can be modeled using either polynomials or a more specific four-parameter model based upon the standard, sigmoidal dose-response curve.

Ablator is a suite of software that automates the microscopic detection of cell targets and also directs a 2-photon microscope to lesion these targets in arbitrary patterns for neuroscience research. See Hayes et al 2012 for an example of its usage (http://www.pnas.org/content/109/21/8286.abstract).

AlgViewer allows navigation, editing and sharing of diagnostic tree-like or scorecard algorithms.

A user-friendly, quick simulator for Bayesian Multi-Arm Multi-Stage Trials

BLIX is a cross-platform set of Python extension modules and Python scripts for Blender (www.blender.org). These scripts add camera calibration, 3D reconstruction and rigid body orientation to Blender.

BBCalc (BodyBuilding Calculators) is a set of calculators related to body building and fitness topics.

A real-time open source alcohol absorption and metabolism simulator for S60 3rd edition mobile phones. Can plot BAC graphs, predefined drinks, sobering-up time estimation and much more!

This project provides one or more subset solutions for the UK National Health Service National Programme for IT. This project provides basic tools for the production and maintenance of SNOMED CT Clinical Terminology subsets.

Computer Controlled Optical Microscopy is a package to enable camera equipped microscopes to generate multi-modal time-lapse image sequences of 3D volumes. This is achieved by periodically changing optical settings, xyz positions and acquiring images.

Dairy Herder is a web application that allows dairies to track lineage and production records for their cows. A main goal is to have a pedigree generated for any given animal with the click of a button.

DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time. Mixed mortality models, such as in Gompertz-Makeham distribution, consider a more general case where mortality is consist of both age-dependent and in-dependent mortality. Mixed models partition mortality into exogenous and endogenous components, so that the intrinsic survivorship can be estimated without the interference from extrinsic noise. DeDAY supports both interval-censored data and exact event-time data. Using MLE (Maximum Likelihood Estimate), DeDAY fits statistic model to the data. DeDAY also calculates the variances and the multi-dimensional confidence limits of model parameters. DeDAY is free for academic users.

Dent-Inn es una aplicación de gestión para clínicas dentales. Almacena los datos de los pacientes, dentigramas, citas y tratamientos, presupuestos, radiografías, informes, etc.

EUtils is a python client-side library for querying the NCBI's Entrez life science databases through the NCBI eUtils web services.

FreePM is an opensource physicians practice management / electronic medical record application. The company providing support for FreePM nolonger exists. You may consider TORCH http://sourceforge.net/projects/op-torch/ or one of the other FOSS EMR's.

FreeBrain will be an application for the analysis of 2D neurophysiological signals, like heart-rate, EEG or eyemovements. It is aimed at those who want intuitive or free software and those who want a customizeble tool that can handle mixed datasets.

Medical Image Reconstruction Framework

Veterinary Practice Management program for management, documentation, accounting etc. in the veterinary practice. Easy to use, intuitive structure. python + PyQt4, postgres database as storage engine. PRE-ALPHA!

This program simply tells you whether you're at a healthy weight. It's available in Turkish and English. Please don't forget to star my app.

Currently implemented: Python parser to import ICD10 XML data into a relational PostgreSQL database Sponsored by Ordium Biotechnology https://ordium.ai MIT License

A very simple software to manage patients' endocrinological info.