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GNAT recognizes gene names in text and maps them to NCBI Entrez Gene
GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID.
March 2017: We started to upload GNAT output on Medline. See files/results/medline/.
Support scientific/logistic process to extract samples from a biobank
This application supports the two process
scientific and logistic .
- register the demand for an analysis
- register the targets, load in the database
- obtain the best list of samples for those targets
(the search can be made with different parameters)
- be able to do it again till the list is not satisfied the statistician ( in term of analysis power ... )
- made the list in an excel spreadsheet
- upload the list of the picked samples and upload the database
- made the list...
Crossplatform menstruation calender with dynamic pdf-report-generation via server-script. The calender is intended for the CLDC profile and MIDP1.0 - like mobile phones, PDA and is written in J2ME.
The server allows dynamic upload and pdf-generation and