Showing 139 open source projects for "atom-project"

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  • 1
    DICOM# open source project is intented to provide an OO class library for DICOM communication and will be developed purely by C# and running in .NET environment. DICOM# partially rewrites dcm4che open source project in C#. This subproject contains the GIT repo for the orignal dicom-cs project: https://sourceforge.net/projects/dicom-cs/.
    Downloads: 0 This Week
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  • 2
    GNU Health

    GNU Health

    GNU Health - The Free/Libre Hospital and Health Information System

    ...GNU Health Hospital and Lab information system is used by academic and research institutions around the globe. It is also used in public health system of countries such as Argentina, India, Jamaica, Laos, Cameroon, Suriname. GNU Health is an official GNU project. GNU Health is brought to you by GNU Solidario, an Non-Profit Organization (NGO) that focuses in Social Medicine.
    Downloads: 17 This Week
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  • 3
    OxyWitleaf2CSV

    OxyWitleaf2CSV

    Witleaf pulse oxymeter BIN format data decoder.

    ...It reads BIN-files produced by popular professional pulse oxymeters manufactured by Shenzhen Witleaf Medical Electronics Co., Ltd. (like the WIT-S300 shown in the photo on the project icon) and produces a CSV-formatted output with the extracted data to stdout (gets printed to the console if not directed otherwise). More info on https://github.com/mrKirushko/OxyWitleaf2CSV .
    Downloads: 4 This Week
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  • 4
    SimPET

    SimPET

    A web platform for the MC simulation of realistic brain PET data

    ...More models are on the way. You can also access all the previously simulated datasets from the dev team to test your quantification pipeline (Files section in this page). This project is an open collaboration between IDIS (www.idisantiago.es), Qubiotech (www.qubiotech.es), and FGUMA (www.fguma.es).
    Downloads: 1 This Week
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  • 5

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    ...Both apps use MySQL for back-end data persistence. Currently, the documentation contained herein is not intended to provide comprehensive instructions on installing and configuring the system. Please contact a project administrator for more information.
    Downloads: 0 This Week
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  • 6
    ...Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5). Our repo moved to GIT (click on tab Git Code), Lowest supported Java now is 1.8 and project code base is in process of redesign (updating libraries and ways how application is built and run). IMPORTANT: Project was moved to GitHub: https://github.com/andyrozman/ggc on 4th April 2024
    Downloads: 6 This Week
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  • 7

    OpenVigil

    Open pharmacovigilance data extraction, mining and analysis tool

    ...OpenVigil 1 operates on raw data, OpenVigil 2 on cleaned data (using drugbank.ca and drugs@FDA), OpenVigilFDA uses the official FDA online API. OpenVigil 2 supports query for ATC codes or certain chemical moieties. Other tools of the OpenVigil project include a calculator for measurements of disproportionality for a 2x2 contingency table and a drugname mapper using RxNorm.
    Downloads: 12 This Week
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  • 8
    BrukerEyes

    BrukerEyes

    BrukerEyes is an open-source package for Bruker datasets management

    BrukerEyes is a cross-platform open-source package for Bruker datasets management. It helps scientists to explore their datasets easily. This project was supported by: European Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 813120 (INSPiRE-MED) © Institute of Scientific Instruments of the Czech Academy of Sciences.
    Downloads: 0 This Week
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  • 9
    HL7 Inspector

    HL7 Inspector

    HL7 Inspector is a tool for managing HL7 messages

    The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com
    Downloads: 9 This Week
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  • 10

    DICOM Confidential

    An open source Java DICOM de-identification toolkit

    DICOM Confidential project develops an open source DICOM (Digital Imaging and Communications in Medicine) de-identification toolkit that provides the necessary flexibility to account for different de-identification requirements.
    Downloads: 1 This Week
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  • 11
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 0 This Week
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  • 12
    Nifty Reg
    This project, initially developed at University College London, contains programs to perform rigid, affine and non-linear registration of nifti or analyse images. Two versions of the algorithms are included, a CPU- and a GPU- (using CUDA) based implementation.
    Downloads: 7 This Week
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  • 13
    This application allow user to predict dissolution profile of solid dispersion systems based on algorithms like symbolic regression, deep neural networks, random forests or generalized boosted models. Those techniques can be combined to create expert system. Application was created as a part of project K/DSC/004290 subsidy for young researchers from Polish Ministry of Higher Education.
    Downloads: 0 This Week
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  • 14
    UMLS::Query is an umbrella for projects that create measures of semantic similarity for the biomedical domain. Our current project is UMLS-Interface and UMLS-Similarity. Our JBI-2007 article was based on Semantic-Similarity and Snomed-Interface.
    Downloads: 0 This Week
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  • 15

    Canon_ex

    Key Data elements and controlled vocabularies For Cardiology

    N.B This Project is DEPRECATED Canon contains an experimental collection of fields - key data elements (2700) and controlled vocabularies - Pick Lists (4000) for cardiology. It can be used for the construction of Electronic Medical Records and to produce structured Reports Is using the Phoenix - Elixir framework and as backend storage is using the Postgresql Database.
    Downloads: 0 This Week
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  • 16

    BMI Wizard

    BMI Wizard calculates the body mass index (BMI)

    BMI Wizard calculates the body mass index (BMI) from weight and size and vice versa.
    Downloads: 1 This Week
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  • 17
    MRiLab

    MRiLab

    A Numerical MRI Simulation Platform

    The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time imaging technique. ...
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    Downloads: 5 This Week
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  • 18
    HAPI
    The HAPI HL7v2 project has moved to the following home: https://hapifhir.github.io/hapi-hl7v2/
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    Downloads: 80 This Week
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  • 19
    BioNLP-Corpora is a repository of biomedically and linguistically annotated corpora and biomedical data sources. There are many resources available in separate packages in this project.
    Downloads: 21 This Week
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  • 20
    DCMLinux - Dicom Linux Distribution

    DCMLinux - Dicom Linux Distribution

    Dicom PACS solution for free.

    ...Just download the iso, burn it to a CD and boot it up. No need to configure any files of dcm4chee, DCMLinux installer asks for everything it needs to configure a running PACS in minutes. Project Wiki : http://wiki.dcmlinux.org Project Forums: http://forums.dcmlinux.org
    Downloads: 4 This Week
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  • 21
    This ohnlp project has released "pipelines" that were contributed by members of the OHNLP Consortium. The pipelines are based on the Apache UIMA framework. medKAT/P, MedCoref, MedTagger, MedXN, and cTAKES are licensed under Apache License V2.0. MedTime is licensed under GNU General Public License version 3.0 (GPLv3). cTAKES development has moved to apache.org.
    Downloads: 0 This Week
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  • 22
    ARIA

    ARIA

    Retinal vessel detection using MATLAB

    NOTE: This project is now hosted at GitHub. Please follow the link below to visit its new home.
    Downloads: 0 This Week
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  • 23
    CanReg5 (moved to Github)

    CanReg5 (moved to Github)

    Canreg5 is a software package for population based cancer registries

    ...If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry, quality control, consistency checks and basic analysis of the data It was designed with an emphasis on user friendliness, it has a modern user interface and is easy to navigate. ...
    Downloads: 2 This Week
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  • 24
    Analyze My Genes

    Analyze My Genes

    Compare gene analysis results from 23andme with the human genome

    This program compares personal gene analysis results from 23andme with extracted databases from the human genome project. An typical example of an extracted database is a dataset which contains all alternative alleles which occur less than 1% of the time.
    Downloads: 0 This Week
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  • 25
    Eviewbox is a java imaging suite, its purpose is to view and spread native DICOM medical images and allowing for 2D reconstructions. EViewbox applet will allow to see the DICOM images on every platform.
    Downloads: 1 This Week
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