Showing 267 open source projects for "x86_64-linux-gnu"

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  • 1
    dcm4che is an implementation of DICOM and IHE actors in Java. Homepage: http://www.dcm4che.org, Google Group: http://groups.google.com/group/dcm4che?hl=en, Wiki: http://www.dcm4che.org/confluence, Issue Tracking: http://www.dcm4che.org/jira
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    Downloads: 995 This Week
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  • 2
    OpenMRS

    OpenMRS

    Open source Health IT for the planet

    OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software.
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    Downloads: 587 This Week
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  • 3
    GNU Gluco Control (GGC) is diabetes management application. It helps managing user's daily data, food data. Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5). Our repo moved to GIT (click on tab Git Code), Lowest supported Java now is 1.8 and project code base is in process of redesign (updating libraries and ways how application is built and run). IMPORTANT: Project was moved to GitHub: https...
    Downloads: 3 This Week
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  • 4
    Grassroots DICOM

    Grassroots DICOM

    Cross-platform DICOM implementation

    Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.
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    Downloads: 115 This Week
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  • 5

    OpenVigil

    Open pharmacovigilance data extraction, mining and analysis tool

    OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting...
    Downloads: 43 This Week
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  • 6
    The Chemistry Development Kit
    The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io
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    Downloads: 28 This Week
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  • 7
    CleverPsych  Practice Management

    CleverPsych Practice Management

    FREE software to manage your psychology or allied health solo practice

    CleverPsych is FREE software for psychologists and other allied health professionals who run their own practices. We have been using CleverPsych in our own practice in Australia since 2007. The system enables you to record your clients, appointments, services, organisations and referring doctors. The aim is to make operations like generating standard letters, claiming from the government and insurance companies, and reporting income, much easier. Look in the Files tab for...
    Downloads: 3 This Week
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  • 8

    SDC

    SDC facilitates development of dist. systems of medical devices.

    OpenSDC is a set of libraries that form a communication framework to facilitate the development of distributed systems of medical devices in high-acuity environments. It is based on the upcoming SDC standard, which is specified by the IEEE in IEEE Std 11073-20702-2016 (Point-of-care medical device communication Part 20702: Medical Devices Communication Profile for Web Services), IEEE Std 11073-10207-2017 (Point-of-care medical device communication Part 10207: Domain Information and Service...
    Downloads: 0 This Week
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  • 9

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans...
    Downloads: 0 This Week
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  • 10
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 3 This Week
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  • 11
    dsam
    The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
    Downloads: 1 This Week
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  • 12

    ASR for Medical Reporting

    Automatic speech recognition system for medical reporting in spanish.

    This is a functional prototype of automatic speech recognition system for medical reporting in Spanish using CMU Sphinx4 ASR toolkit. This ASR use pre-trained acoustic model and context dependent language model in nuclear medicine diagnostics.
    Downloads: 0 This Week
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  • 13
    HL7 Inspector

    HL7 Inspector

    HL7 Inspector is a tool for managing HL7 messages

    The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com
    Downloads: 6 This Week
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  • 14
    PPIXpress

    PPIXpress

    specific protein interaction networks from transcript expression

    Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal...
    Downloads: 1 This Week
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  • 15

    DICOM Confidential

    An open source Java DICOM de-identification toolkit

    DICOM Confidential project develops an open source DICOM (Digital Imaging and Communications in Medicine) de-identification toolkit that provides the necessary flexibility to account for different de-identification requirements.
    Downloads: 0 This Week
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  • 16
    TIES

    TIES

    A smart search engine for medical documents

    TIES (Text Information Extraction System) is a clinical text search engine that uses Natural Language Processing techniques to extract medical concepts from free text clinical reports. It provides secure de-identified access to this information and has in built collaboration tools and honest broker functionality. It is licensed for academic use under the BSD license. For commercial use please contact Nexi at http://nexihub.com *** NOTICE: this software and forum are no longer...
    Downloads: 0 This Week
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  • 17
    medSLT - The Medical Speech Translator
    Downloads: 0 This Week
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  • 18
    PPICompare

    PPICompare

    detection of rewiring events in protein interaction networks

    PPICompare detects statistically significant rewiring events in protein-protein interaction networks - even if they are caused by alternative splicing - and reports plenty of information to that. The input data needs to be constructed with PPIXpress (see https://sourceforge.net/projects/ppixpress/). The original publication can be found on https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-017-0400-x.
    Downloads: 1 This Week
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  • 19

    OpenEmergency

    "OpenEmergency - Open source helping you save lives!"

    The goal of OpenEmergency is to provide software for organizations that typically are unable to afford commercial level software (i.e. volunteer organizations or small providers). keywords: ambulance, dispatch, EMS, 911, police, fire, emergency, ambulanc
    Downloads: 0 This Week
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  • 20
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
    Downloads: 0 This Week
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  • 21
    This application allow user to predict dissolution profile of solid dispersion systems based on algorithms like symbolic regression, deep neural networks, random forests or generalized boosted models. Those techniques can be combined to create expert system. Application was created as a part of project K/DSC/004290 subsidy for young researchers from Polish Ministry of Higher Education.
    Downloads: 1 This Week
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  • 22
    DicomReader is a simple Java Dicom files decipher. It handles headers and images within as well; data (headers and pixel-value images) will be saved into ascii clear text files. A pgm version of the image files is also provided.
    Downloads: 0 This Week
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  • 23
    GNAT

    GNAT

    GNAT recognizes gene names in text and maps them to NCBI Entrez Gene

    GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline. See files/results/medline/.
    Downloads: 0 This Week
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  • 24
    La app está programada en Java así que funciona en Windows, Linux, Solaris, Mac, etc. Solo necesitas tener instalado java (http://www.java.com/getjava) Básicamente es una calculadora para medir la Grasa Corporal, Masa Magra (musculatura), Tasa Metabólica Basal (La cantidad de calorías que necesitas consumir por día para subsistir), IMC (indice de Masa Corporal) e índice cintura/altura. Solo tenés que colocar las medidas, peso, altura y edad para que te dé lo que necesitas saber...
    Downloads: 0 This Week
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  • 25
    GDL Editor

    GDL Editor

    Computerized guideline editor for clinical decision support

    The GDL editor is multiplatform application that allows users to create, edit and run GDL files. GDL is a formal language designed to represent clinical knowledge for decision support. It is designed to be natural language- and reference terminology- agnostic by leveraging the designs of openEHR Reference Model and Archetype Model. The tool provides an editing and testing environment capable of generating forms based on the elements defined in the GDL. Requirements: Java Runtime...
    Downloads: 0 This Week
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