Search Results for "model-builder"
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Showing 52 open source projects for "model-builder"
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Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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SimulAdren
A simulation program for the HPA axis.
SimulAdren is a simulation program for the hypothalamus-pituitary-adrenal axis (HPA feedback control). It is based on a nonlinear MiMe-NoCoDI model and uses the CyberUnits Bricks class library. -
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SimulaBeta
A simulation program for insulin-glucose homeostasis.
SimulaBeta is a simulation program for insulin-glucose feedback control. It is based on a nonlinear MiMe-NoCoDI model. -
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UoMqVXL
Qt based GUI classes for the VXL Computer Vision Libraries
Qt based GUI classes for VXL from the University of Manchester. Includes libraries to display VXL images and graphics, including shape model manipulation. Also includes tools to display images and points, and to annotate images with points. -
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SimThyr
A simulation program for thyroid homeostasis.
SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. -
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SDC
SDC facilitates development of dist. systems of medical devices.
...It is based on the upcoming SDC standard, which is specified by the IEEE in IEEE Std 11073-20702-2016 (Point-of-care medical device communication Part 20702: Medical Devices Communication Profile for Web Services), IEEE Std 11073-10207-2017 (Point-of-care medical device communication Part 10207: Domain Information and Service Model for Service-Oriented Point-of-Care Medical Device Communication), and P11073-20701 (IEEE Draft Standard for Service-Oriented Medical Device Exchange Architecture & Protocol Binding). The SDC standard has the goal to meet increasing demand for medical device interoperability in an Integrated Clinical Environment (ICE), see also ASTM F2761-1:2009. ... -
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Vascular prediction
Study develops predictive model to reduce 90-day readmissions.
In recent years, hospital readmissions have increased, affecting public evaluations and pay-for-performance measures. A study developed a predictive model for 90-day hospital readmission in patients undergoing elective vascular procedures. The best predictive model was Shrinkage Discriminant Analysis, which considered variables such as length of stay, comorbidity scores, procedure type, and admission type. The model indicates that efforts to reduce vascular readmissions should prioritize emergency procedures. ... -
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virus-infection-simulation
Virus Infection Simulation
ViruSim is a model of real world virus infection. That does not mean ViruSim is an exact simulation. But it lets you imagine how certain features if Patient/Virus interactions take place. ViruSim simulates Patients and Viruses in a pool/container 100 by 100 units each side, by 1000 units in depth. There are 1 to 5000 total number of Patients/Viruses, with a chosen percentage of patients, and the remaining percentage of viruses. -
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MAGeCK
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
MAGeCK2 is here: https://github.com/davidliwei/mageck2 Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. ... -
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The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
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FRUITS
Food Reconstruction Using Isotopic Transferred Signals
Description IMPORTANT NOTICE: The current release of FRUITS (FRUITS 3.1) will be the last as a Windows installer. This version is the closest to the soon to be released R-based ReSources package as part of the IsoMemo initiative. FRUITS is a Bayesian mixing model for diet reconstruction using isotopic data. -
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ASR for Medical Reporting
Automatic speech recognition system for medical reporting in spanish.
This is a functional prototype of automatic speech recognition system for medical reporting in Spanish using CMU Sphinx4 ASR toolkit. This ASR use pre-trained acoustic model and context dependent language model in nuclear medicine diagnostics. -
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Tissue Simulation Toolkit is a two-dimensional library for the Cellular Potts Model (Graner and Glazier 1992; Phys. Rev. Lett. 69, 2013), which is increasingly used by computational biologists to study tissue patterning and developmental mechanisms.
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DICOM Image Reader
A minimal Medical application to read and view DICOM (dcm) image file
.... =============== Requirements: - Processor: Intel Pentium 4 processor or later that's SSE2 capable - RAM: 512 MB - Hard Disk: 1500 MB - Video Card: nVidia, ATI and Intel Shader Model 2 and Shader Model 3 video cards with 512 megabytes of RAM minimum - Supported OS: Windows 10, Windows 8, Windows 8.1, Windows 7 =============== Alternative software for Windows: Available on Ecwid - https://goo.gl/twBcAq =============== Android App: https://goo.gl/i4NX9K -------------- Chrome app Release Pro: https://goo.gl/p456N5 -
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BEMoDA
Dissolution profile comparison Model Dependent-Independent Approach
Dissolution profile comparison (Biowaiver aid) Model Dependent-Independent Approach scripts for in-vitro dissolution profile comparison as proposed by Sathe et al. in 1996 (Sathe PM, Tsong Y, Shah VP. In-vitro dissolution profile comparison: statistics and analysis, model dependent approach. Pharm Res. 1996 Dec;13(12):1799-803) and Tsong et al. in 1996 (Tsong Y, Hammerstrom T, Sathe P, Shah VP. (1996) Statistical Assessment of Mean Differences between Two Dissolution Data Sets, Drug Info. ... -
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GDL Editor
Computerized guideline editor for clinical decision support
...GDL is a formal language designed to represent clinical knowledge for decision support. It is designed to be natural language- and reference terminology- agnostic by leveraging the designs of openEHR Reference Model and Archetype Model. The tool provides an editing and testing environment capable of generating forms based on the elements defined in the GDL. Requirements: Java Runtime Enviroment (JRE) 1.6 or higher -
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MRiLab
A Numerical MRI Simulation Platform
...The main MRiLab simulation platform combined with those toolboxes can be applied to customize various virtual MR experiments which can serve as a prior stage for prototyping and testing new MR technique and application. If you find MRiLab useful for your work, please cite this paper: Fast Realistic MRI Simulations Based on Generalized Multi-Pool Exchange Tissue Model. IEEE Transactions on Medical Imaging. 2016. doi: 10.1109/TMI.2016.2620961 -
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XL Toolbox
Data analysis and visualization for Excel, for free
XL Toolbox is a free Excel statistics addin that helps analyzing and presenting data: Smart custom error bars, chart design, chart export to TIFF; formula builder, transpose wizard, analysis of variance (ANOVA); automatic backups, workbook management and more. -
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Ogles strives to provide an open source data model for neuroscientific data visualization and analytics. Ogles started out as a planning system for frame based stereotactic neurosurgery. Ogles(1) is discontinued. Release candidate (RC) is Ogles2b. Ogles is accompanied by a simple DICOM reader and NIfTI converting tool (Sdr2).
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pyQPCR is a GUI application written in python that deals with quantitative PCR (QPCR) raw data. Using quantification cycle values extracted from QPCR instruments, it uses a proven and universally applicable model to give finalized quantification resu
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SCRalyze
A matlab environment for model-based psychophysiology
SCRalyze is a powerful tool for model-based analysis of psychophysiological signals, using linear convolution models and dynamic causal modelling. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM (formerly SCRalyze) has been moved to https://github.com/bachlab/PsPM . -
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Ezys
Ezys 3D medical image registration program
...On these systems, non-linear image registrations take less than a minute to complete. Ezys implements a diffeomorphic inverse consistent image registration algorithm with a demons-style regularization based on a non-parametric free form deformation model. Mutual Information and Normalized Mutual Information cost functions make Ezys a perfect tool for an inter-modal image registration. -
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
...Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image processing filters. Zinc model data structures are dynamic, supporting interactive applications which programmatically create, destroy and modify parts of models. -
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Census is a comprehensive cross-platform project manager and integration hub for NONMEM, the gold standard tool for model-based pharmacometric data analysis.
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DeDAY
MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.
...Mixed models partition mortality into exogenous and endogenous components, so that the intrinsic survivorship can be estimated without the interference from extrinsic noise. DeDAY supports both interval-censored data and exact event-time data. Using MLE (Maximum Likelihood Estimate), DeDAY fits statistic model to the data. DeDAY also calculates the variances and the multi-dimensional confidence limits of model parameters. DeDAY is free for academic users.
