Showing 22 open source projects for "user"

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  • 1
    SMILI

    SMILI

    Scientific Visualisation Made Easy

    ...The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). ...
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    Downloads: 53 This Week
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  • 2
    PhysiCell

    PhysiCell

    physics-based multicellular simulator

    PhysiCell is a cross-platform C++ framework for large, physics-based multicellular simulations.
    Downloads: 8 This Week
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  • 3
    gVirtualXRay

    gVirtualXRay

    Virtual X-Ray Imaging Library on GPU

    gVirtualXRay is a C++ library to simulate X-ray imaging. It is based on the Beer-Lambert law to compute the absorption of light (i.e. photons) by 3D objects (here polygon meshes). It is implemented on the graphics processing unit (GPU) using the OpenGL Shading Language (GLSL). SimpleGVXR is a smaller library build on the top of gVirtualXRay. It provides wrappers to Python, R, Ruby, Tcl, C#, Java, and GNU Octave.
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    Downloads: 9 This Week
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  • 4
    SimPET

    SimPET

    A web platform for the MC simulation of realistic brain PET data

    SimPET (http://www.sim-pet.org) is an open, efficient, and user‐friendly online platform for the generation of synthetic brain PET datasets. The platform offers the ability to generate realistic activity and attenuation maps from patient's PET/CT and MRI images. These maps can then be simulated, and sinograms and simulated images can be downloaded. More advanced features can be obtained by using the SimPET scripts: https://github.com/txusser/brainviset_simset https://github.com/txusser/simpet (New version pre-alpha) You can also upload your own phantoms to simulate. ...
    Downloads: 0 This Week
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    OpenVCT

    The Open-Source Virtual Clinical Trial Project

    The OpenVCT project is designed to provide a common platform for performing Virtual Clinical Trials of medical imaging. OpenVCT provides tools for simulation of patient accrual and reader studies of medical imaging devices, simulating by simulating cohorts of patients and readers. OpenVCT uses common data standards, such as DICOM, to ensure inter-compatibility.
    Downloads: 0 This Week
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  • 6

    toothache

    A conversion utility from proprietary TIF exams to DICOM standard

    This application is able to convert TIF radiology exams to DICOM objects
    Downloads: 0 This Week
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  • 7
    IQM

    IQM

    Scientific Image and Signal Analysis in Java

    IQM has moved to GitHub
    Downloads: 1 This Week
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  • 8

    MIPPY

    Modular Image Processing in Python

    MIPPY is a minimalistic DICOM image browser with built-in image processing modules. Its modular design means it can be extended with any number of user-created modules for image processing and analysis.
    Downloads: 0 This Week
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  • 9
    ImagingAnalysis

    ImagingAnalysis

    Direct tissue-level image quantification package for Mathematica

    ImagingAnalysis is a Mathematica package that performs grid-based analysis of time-lapse imaging data saved in a sequence of TIFF files. This package requires Mathematica 7.0. Revised on 14 May 2017: Bugs are fixed and incompatibility issues are resolved. The current version runs on Mathematica 11.
    Downloads: 0 This Week
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  • 10
    RTToolbox

    RTToolbox

    Library to support quantitative analysis of radiotherapy data

    Moved to: http://github.com/MIC-DKFZ/RTTB RTToolbox is a software library, developed at the DKFZ to support quantitative analysis of treatment outcome for radiotherapy. The RTToolbox was designed following object-oriented design principles and was implemented in the language C++. It supports the import of radiotherapy data (e.g. dose distributions and structure sets) from DICOM-RT format and other standard image processing formats by using a bridge to ITK. The RTToolbox supports...
    Downloads: 0 This Week
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  • 11
    MRiLab

    MRiLab

    A Numerical MRI Simulation Platform

    The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time...
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    Downloads: 8 This Week
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  • 12
    NiftyRec
    This project, developed at UCL London, provides code for tomographic reconstruction. NiftyRec is written in C and has Python and Matlab extensions. Computationally intensive functions have a GPU accelerated version based on CUDA.
    Downloads: 0 This Week
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  • 13
    The Neurophysiological Biomarker Toolbox
    NBT is an open source Matlab toolbox for the computation and integration of neurophysiological biomarkers. NBT allows for easy implementation of new biomarkers, and incorporates an online wiki with extensive help and tutorials.
    Downloads: 0 This Week
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  • 14
    Orthanc

    Orthanc

    Lightweight, RESTful DICOM server for healthcare and medical research

    [2015-06-12] Orthanc has left SourceForge. All the downloads are now available directly from our official Website: http://www.orthanc-server.com/browse.php
    Downloads: 1 This Week
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  • 15
    medintux

    medintux

    Gestion de Cabinet Medical / Medical Patient Record

    Since 2 months, new version will arrive in QT5, with better integration of multimedia document and multilanguage support. If you have some specificity in your country, tell us we can integrate it. Medintux est une suite logicielle pour la gestion du cabinet médical et des services hospitaliers. Agrément ROSP, Compatible HAS avec le Vidal ou Thériaque, CIM10, codage CCAM. Liaison Sesam Vitale, Hprim, Apicrypt, Sigems. 100% Paramétrable et personnalisable. Environnement : Fonctionne sous...
    Downloads: 31 This Week
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  • 16
    Gadgetron

    Gadgetron

    Medical Image Reconstruction Framework

    Medical Image Reconstruction Framework
    Downloads: 1 This Week
    Last Update:
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  • 17
    MRI-PDQ:Phase Detection & Quantification

    MRI-PDQ:Phase Detection & Quantification

    Detect sphere-shaped paramagnetic deposits in MRI datasets

    Moved to http://parkermills.github.io/MRI-PDQ/
    Downloads: 0 This Week
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  • 18
    MRI-PSM: Phase Slope Magnitude Imaging

    MRI-PSM: Phase Slope Magnitude Imaging

    Generate positive-contrast images emphasizing magnetic field variation

    Moved to: http://parkermills.github.io/MRI-PSM/
    Downloads: 0 This Week
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  • 19

    DRAMMS

    A Deformable Medical Image Registration Toolbox

    DRAMMS is a software package designed for 2D-to-2D and 3D-to-3D deformable medical image registration tasks. Released by Section of Biomedical Image Analysis (SBIA) at the University of Pennsylvania. Some typical applications of DRAMMS include, -- Cross-subject registration of the same organ (can be brain, breast, cardiac, etc); -- Mono- and Multi-modality registration (MRI, CT, histology); -- Longitudinal registration (pediatric brain growth, cancer development, mouse...
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    Downloads: 17 This Week
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  • 20
    MatrixUser

    MatrixUser

    A Multi-functional GUI-based Program for Image Processing and Analysis

    The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation. However, within Matlab, most of image manipulation functions are limited or...
    Downloads: 0 This Week
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  • 21
    Oree
    Oree - Optimum Real-time Estimation of Events of Interaction: real-time reconstruction of photon interaction events in Gamma Cameras. Optionally making use of a CUDA enable GPU, Oree achieves reconstruction of over 1M events/sec.
    Downloads: 0 This Week
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  • 22
    The openLBMflow is an fast fluid flow solver based on Lattice Boltzmann Method. Main future are 2D and 3D code, single and multiphase models, Output data in VTK format can be directly open in Paraview. Download Windows or Linux binary version now.
    Downloads: 0 This Week
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