Showing 21 open source projects for "sample"

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  • 1
    Image Harmonization Dataset iHarmony4

    Image Harmonization Dataset iHarmony4

    The first large-scale public benchmark dataset for image harmonization

    ...The iHarmony4 dataset comprises four sub-datasets (HCOCO, HAdobe5k, HFlickr, Hday2night), each making composite images by combining a foreground from one image with a background from another, along with associated ground truth harmonized images and foreground masks. The dataset is intended as a benchmark resource to enable and standardize research in image harmonization. Each composite sample has: composite image, foreground mask, and corresponding real harmonized image.
    Downloads: 0 This Week
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  • 2
    CometAnalyser

    CometAnalyser

    CometAnalyser, for quantitative comet assay analysis.

    ...Once the comets are segmented and classified, several intensity/morphological features are automatically exported as a spreadsheet file. Video Tutorial: CometAnalyser is written in MATLAB. It works with Windows, Macintosh, and UNIX-based systems. Please, download the sample datasets and test it watching the video tutorial to understand how it works: https://www.youtube.com/watch?v=vh2VFnMw50A Contacts: filippo.piccinini85@gmail.com beleonattila@gmail.com
    Downloads: 14 This Week
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  • 3
    MTCNN Face Detection Alignment

    MTCNN Face Detection Alignment

    Joint Face Detection and Alignment

    ...The repository includes Caffe / MATLAB code, support scripts, and instructions for dependencies. Non-maximum suppression and bounding box regression at each stage. Online hard sample mining to improve training robustness.
    Downloads: 0 This Week
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  • 4
    NTU RGB-D

    NTU RGB-D

    Info and sample codes for "NTU RGB+D Action Recognition Dataset"

    The “NTU RGB+D” repository provides access to a large-scale dataset for human action recognition (and its extension, NTU RGB+D 120). The dataset includes multiple modalities (RGB video, depth sequences, infrared video, 3D skeletal joint data) captured with multiple Kinect v2 cameras simultaneously. The repository also contains MATLAB / Python demo scripts for loading, visualizing, and processing skeleton data, mapping between modalities, and handling dataset structure. Multi-modal action...
    Downloads: 2 This Week
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  • 5
    CAM

    CAM

    Class Activation Mapping

    ...The method involves modifying a CNN model slightly (e.g., using global average pooling before the final layer) to produce a weighted combination of feature maps as the class activation map. Integration with existing CNNs (with light modifications). Sample scripts/examples using standard architectures. The repo provides example code and instructions for applying CAM to existing CNN architectures. Visualization of discriminative regions per class.
    Downloads: 0 This Week
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  • 6
    ANDTool

    ANDTool

    Analysis Nuclei DAB (AND) Tool

    ...The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI. ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download. USER MANUAL: see the specific PDF available in the Files section. REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. ...
    Downloads: 0 This Week
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  • 7
    Omniglot

    Omniglot

    Omniglot data set for one-shot learning

    ...The dataset provides both an image representation of each character and the time-ordered stroke coordinates ([x, y, t]) for each instance. Includes stroke data (time-sequenced coordinates) per sample. The repository is intended as a benchmark dataset in few-shot / meta-learning research, not as a plug-and-play detection or classification engine. Pre-split “background” and “evaluation” alphabets for standard benchmarking.
    Downloads: 0 This Week
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  • 8
    MATLAB Robotics

    MATLAB Robotics

    MATLAB sample codes for mobile robot navigation

    MATLABRobotics is a collection of robotics-related algorithms and simulation tools implemented in MATLAB. The repository brings together a wide range of robotics functionality, including path planning, control, localization, and mapping. It provides practical algorithmic implementations such as A*, RRT, Kalman filters, particle filters, and SLAM, making it a valuable resource for students, researchers, and developers learning or prototyping robotics applications. The code is written to be...
    Downloads: 1 This Week
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  • 9
    MAT-MECAS

    MAT-MECAS

    Cell impedance analysis software.

    ...The calculations are based on a FFT deconvolution procedure and on approximation of the reconstructed currents with a theoretical function. The impulse response of the signal path is necessary for the calculations. Read manual first! For testing MAT-MECAS we provide a sample data along with sample stimulation protocols.
    Downloads: 0 This Week
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  • 10
    Matlab Toolbox 'Measures of Effect Size'
    A set of Matlab functions which compute effect size statistics and (exact) confidence intervals for a wide range of data analysis situations, including two-sample-, oneway-, twoway- and contrast analyses as well as categorical data in tables.
    Downloads: 0 This Week
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  • 11
    Ocean Optics Sample Pack

    Ocean Optics Sample Pack

    Sample code for Ocean Optics OmniDriver spectrometer device driver

    Sample code demonstrating how to use OmniDriver to drive Ocean Optics full range of spectrometers from C, C++, C#, Java, LabVIEW, Delphi, MATLAB and more.
    Downloads: 0 This Week
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  • 12
    ...Though, initially developed for experiments related to fretting wear but can be effectively used to interpret experimental data from any field. The attached files contain source code as well as a sample MATLAB (.mat) data file of 13 variables. It could be replaced to the data file of your choice. The code is open source but you are requested to give credits if used. Additionally, it also has some useful functions for exporting and generating publication quality figures for different kind of figures in MATLAB
    Downloads: 0 This Week
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  • 13

    PB-sQF_BacterialTyping

    Bacterial Typing from either assembled or raw short reads file

    ...The input file is the k-mer counts of the unknown assembled genome sequence or raw short reads file in decimal format generated by KAnalyze developed by P. Audano et al. (https://sourceforge.net/projects/kanalyze/). The download included the library index, the library name and sample unknowns.
    Downloads: 0 This Week
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  • 14

    MetaOpen

    Metabolomics Bioinformatics Tools

    ...We use a number of high-throughput analytical platforms including multidimensional liquid chromatography-mass spectrometry (MDLC-MS) for proteomics, and for metabolomics; liquid chromatography-mass spectrometry (LC-MS), and comprehensive two-dimensional gas chromatography-mass spectrometry (GCxGC/TOF-MS). Each type of analysis affords limited analyte coverage of molecules present in a patient sample and therefore provides only a partial molecular profile for an individual patient. These diverse analytical data must be integrated with advanced bioinformatics methods for accurate evaluation of health and detection of disease susceptibility.
    Downloads: 0 This Week
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  • 15

    MatlabSimulink2CPP

    Demo of Simulink to C++ C or HDL FGA for HFT potential

    Video and files download for Visual trading idea to C++ or FPGA HFT Meetup File download sample: test model (Matlab 2014b with Visual Studio 2013 C++ project generated) Powerpoint MATLAB SIMULINK http://quantlabs.net/blog/2015/04/video-and-files-download-for-visual-trading-idea-to-c-or-fpga-hft-meetup/
    Downloads: 0 This Week
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  • 16

    GUItars

    GUItars is designed for the analysis of high throughput RNAi data.

    ...GUItars's user-friendly graphical interface enables rapid analysis of RNAi and small molecule screens. GUItars uses SSMD for hit selection, which is preferred for its ability to diminish sample size effects and the false hit rate, making it superior to other widely used HTS analysis methods. The program can handle the analysis for screens without replicates as well as with replicates. For comparison purposes, non-SSMD-based methods such as percent activity, z-score, and t-test are also provided as scoring options. Version 2.1 released: several bugs fixed. ...
    Downloads: 0 This Week
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  • 17
    PlaTypUS

    PlaTypUS

    Plasmodium Typing Utility Software

    The goal of PlaTypUS is to establish a unified Plasmodium whole genome analysis tool, that aligns short read sequences in an agreed upon manner, with many quality control steps, and calls both SNVs and CNVs in a community agreed standard way. We also seek to provide this analysis in a stand-alone graphic user interface so that labs around the world can analyze their own whole genome sequencing data, rather than relying on outside institutes.
    Downloads: 0 This Week
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  • 18
    A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
    Downloads: 0 This Week
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  • 19

    MetCore

    Metabolomics Bioinformatics Tools

    ...We use a number of high-throughput analytical platforms including multidimensional liquid chromatography-mass spectrometry (MDLC-MS) for proteomics, and for metabolomics; liquid chromatography-mass spectrometry (LC-MS), and comprehensive two-dimensional gas chromatography-mass spectrometry (GCxGC/TOF-MS). Each type of analysis affords limited analyte coverage of molecules present in a patient sample and therefore provides only a partial molecular profile for an individual patient. These diverse analytical data must be integrated with advanced bioinformatics methods for accurate evaluation of health and detection of disease susceptibility.
    Downloads: 0 This Week
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  • 20

    Open Genetic Algorithm Toolbox

    This is a MATLAB toolbox to run a GA on any problem you want to model.

    This is a toolbox to run a GA on any problem you want to model. You can use one of the sample problems as reference to model your own problem with a few simple functions. You can collaborate by defining new example problems or new functions for GA, such as scaling, selection or adaptation methods. In that case, you should then include your credits in the file, upload it to matlab central and contact the author.
    Downloads: 0 This Week
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  • 21
    A MATLAB package to simulate sample paths of the solution of a Itô or Stratonovich stochastic differential equation (SDE), compute statistics and estimate the parameters from data. A note of caution: SDE Toolbox is no more developed but it's still downloadable. Its inferential capabilities can be considered surpassed (at best). Actually the parameter estimation methods were already far from the state-of-art when the project began in 2007 (!).
    Downloads: 1 This Week
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